RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 GALNT17Q6IS24 598 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 CXorf57Q6NSI4 855 aaKnown RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 TSHZ1Q6ZSZ6 1077 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 RHOUQ7L0Q8 258 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 ZNF627Q7L945 461 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 C14orf80Q86SX3 495 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 FAM90A1Q86YD7 464 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 DENND1CQ8IV53 801 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 VRK3Q8IV63 474 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 CCDC60Q8IWA6 550 aaPredicted RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 SMAP1Q8IYB5 467 aaPredicted RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 KIAA0319LQ8IZA0 1049 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 MYO1HQ8N1T3 1032 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 CELF5Q8N6W0 485 aaKnown RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 NECAB1Q8N987 351 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 PDPRQ8NCN5 879 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 GDPD5Q8WTR4 605 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 ZNF689Q96CS4 500 aaPredicted RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 ZSCAN31Q96LW9 406 aaPredicted RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 NT5C1BQ96P26 610 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 YME1L1Q96TA2 773 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 RIT2Q99578 217 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 LLPHQ9BRT6 129 aaKnown RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 FAM49AQ9H0Q0 323 aaPredicted RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 MRPL46Q9H2W6 279 aaKnown RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 WDCPQ9H6R7 721 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 METTL14Q9HCE5 456 aaKnown RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 GABBR1Q9UBS5 961 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 PCDHA10Q9Y5I2 948 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 TRPV2Q9Y5S1 764 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 TRIP12Q14669 1992 aaPredicted RBP3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 IGSF9BQ9UPX0 1349 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 KDM3AQ9Y4C1 1321 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 XIRP2A4UGR9 3374 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 COL1A2P08123 1366 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 DOCK5Q9H7D0 1870 aa3.88□□□□□ -1.79
UBE2D3-226ENST00000508635 WDR81Q562E7 1941 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 MYH9P35579 1960 aaKnown RBP3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 PRUNE2Q8WUY3 3088 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 VCANP13611 3396 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 CYP3A7-CYP3A51PA0A087WV96 503 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 MARCH11A6NNE9 402 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 E9PLN8 166 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 C5orf67F2Z3F1 127 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 M0QZ92 97 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 VPS4BO75351 444 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 PSMD10O75832 226 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 CDKL5O76039 1030 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 ZFPL1O95159 310 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 STBD1O95210 358 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 MATN4O95460 622 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 TDP2O95551 362 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 HDCP19113 662 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 CYP3A7P24462 503 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 SFNP31947 248 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 BMPR1AP36894 532 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 MCM2P49736 904 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 ST3GAL1Q11201 340 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 GPM6BQ13491 265 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 FHL2Q14192 279 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 NONOQ15233 471 aaKnown RBP eCLIP3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 LLGL1Q15334 1064 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 GEN1Q17RS7 908 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 AAK1Q2M2I8 961 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 TMEM266Q2M3C6 531 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 KHDC1LQ5JSQ8 128 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 CPLX2Q6PUV4 134 aaKnown RBP3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 MOXD1Q6UVY6 613 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 FAM43BQ6ZT52 329 aaPredicted RBP3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 TRMT1LQ7Z2T5 733 aaKnown RBP3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 DAAM2Q86T65 1068 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 TCEAL8Q8IYN2 117 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 BLIDQ8IZY5 108 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 CFAP52Q8N1V2 620 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 LINC01465Q8N7H1 131 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 TET1Q8NFU7 2136 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 ETNPPLQ8TBG4 499 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 TBCKQ8TEA7 893 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 GTF3C6Q969F1 213 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 GJA10Q969M2 543 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 NACC2Q96BF6 587 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 MRPL38Q96DV4 380 aaKnown RBP3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 FAM167AQ96KS9 214 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 MBOAT7Q96N66 472 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 VKORC1Q9BQB6 163 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 LRFN3Q9BTN0 628 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 TEKT3Q9BXF9 490 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 FTHL17Q9BXU8 183 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 PCED1AQ9H1Q7 454 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 UNC45AQ9H3U1 944 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 ERVK-5Q9HDB9 667 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 NRBP2Q9NSY0 501 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 MRPS18AQ9NVS2 196 aaKnown RBP3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 SIDT1Q9NXL6 827 aaKnown RBP3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 CFAP97Q9P2B7 532 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 CHD7Q9P2D1 2997 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 PADI3Q9ULW8 664 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 KCNJ14Q9UNX9 436 aa3.87□□□□□ -1.79
UBE2D3-226ENST00000508635 COG5Q9UP83 839 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms