RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LRIG3Q6UXM1 1119 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 CYP26C1Q6V0L0 522 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 CCNI2Q6ZMN8 369 aaPredicted RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 CCDC129Q6ZRS4 1044 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 PPP1R3BQ86XI6 285 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 IFT20Q8IY31 132 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 MYOCDQ8IZQ8 938 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 CPA6Q8N4T0 437 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 SMYD1Q8NB12 490 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 MLKLQ8NB16 471 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ENGASEQ8NFI3 743 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ERMNQ8TAM6 284 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 SMCR8Q8TEV9 937 aaPredicted RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 AENQ8WTP8 325 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 IRGQQ8WZA9 623 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 TBC1D5Q92609 795 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 RGMAQ96B86 450 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 LTV1Q96GA3 475 aaPredicted RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 RBM17Q96I25 401 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 CCT8L2Q96SF2 557 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 RHOXF2Q9BQY4 288 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 QTRT1Q9BXR0 403 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 TTYH3Q9C0H2 523 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 YIPF3Q9GZM5 350 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 DLL3Q9NYJ7 618 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 NDUFA13Q9P0J0 144 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 PDP2Q9P2J9 529 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 BTBD3Q9Y2F9 522 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 TMED5Q9Y3A6 229 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 SAR1BQ9Y6B6 198 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 QSER1Q2KHR3 1735 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 N4BP2Q86UW6 1770 aaPredicted RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 MYH15Q9Y2K3 1946 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 RGPD5Q99666 1765 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 USP42Q9H9J4 1324 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 ANKRD65E5RJM6 399 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 ATP5HO75947 161 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 ANP32DO95626 131 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 RPSAP08865 295 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 CHRNA5P30532 468 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 CYP2C18P33260 490 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 PTGER1P34995 402 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 LIPAP38571 399 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SKIV2L2P42285 1042 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SERPINB8P50452 374 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 HK3P52790 923 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 EEFSECP57772 596 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 ZBTB17Q13105 803 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 E2F5Q15329 346 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 DEFB115Q30KQ5 88 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SUPT20HL1Q3ZLR7 823 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 Q4G0T1 1027 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 PCID2Q5JVF3 399 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SPDYCQ5MJ68 293 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 TREML2Q5T2D2 321 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 THEMIS2Q5TEJ8 643 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 MORN5Q5VZ52 161 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 FAM160B1Q5W0V3 765 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SLC18B1Q6NT16 456 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 DTX2Q86UW9 622 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 TMEM139Q8IV31 216 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 FAM177A1Q8N128 213 aaPredicted RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 MMGT1Q8N4V1 131 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 PDILTQ8N807 584 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 CCDC197Q8NCU1 140 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 STKLD1Q8NE28 680 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 ZCRB1Q8TBF4 217 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 TEKT4Q8WW24 435 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 CENPTQ96BT3 561 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 LRRC45Q96CN5 670 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 RRP36Q96EU6 259 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 ATP6V1G3Q96LB4 118 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 ZMAT2Q96NC0 199 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SLC46A1Q96NT5 459 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 OLFM3Q96PB7 478 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 NELL2Q99435 816 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SMAD5Q99717 465 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SLC13A1Q9BZW2 595 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 LSG1Q9H089 658 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 STMN4Q9H169 189 aaPredicted RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SIL1Q9H173 461 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 MIS18AQ9NYP9 233 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 IL1RAPL1Q9NZN1 696 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 WDR35Q9P2L0 1181 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 BAIAP2L1Q9UHR4 511 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 TUBE1Q9UJT0 475 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 SERTAD3Q9UJW9 196 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 LUC7L2Q9Y383 392 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 COMMD3-BMI1R4GMX3 469 aa4.84□□□□□ -1.63
PDLIM5-211ENST00000508531 ABCC6O95255 1503 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 RFX7Q2KHR2 1363 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 GPR75-ASB3A0A0A6YYF3 556 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 EME2A4GXA9 379 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 E7EVH7 732 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 PPP6CO00743 305 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 WDR46O15213 610 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 SLC16A6O15403 523 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms