RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 LIG4P49917 911 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 CLCNKBP51801 687 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 CASP5P51878 434 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 ZNF131P52739 623 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 KRTAP10-11P60412 298 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 GRIK3Q13003 919 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 COASYQ13057 564 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 BMS1Q14692 1282 aaKnown RBP4.91□□□□□ -1.62
NUP54-206ENST00000508465 PTPN14Q15678 1187 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 MAN2A1Q16706 1144 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 ERCC6LQ2NKX8 1250 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 USP41Q3LFD5 358 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 COLEC12Q5KU26 742 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 SLC39A4Q6P5W5 647 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 DCLRE1AQ6PJP8 1040 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 CCDC73Q6ZRK6 1079 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 ZNF720Q7Z2F6 126 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 RD3Q7Z3Z2 195 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 NOP9Q86U38 636 aaKnown RBP4.91□□□□□ -1.62
NUP54-206ENST00000508465 GLCCI1Q86VQ1 547 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 ADHFE1Q8IWW8 467 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 BEND2Q8NDZ0 799 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 NOC3LQ8WTT2 800 aaKnown RBP4.91□□□□□ -1.62
NUP54-206ENST00000508465 NELL1Q92832 810 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 MYEOVQ96EZ4 313 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 PPP1R10Q96QC0 940 aaKnown RBP4.91□□□□□ -1.62
NUP54-206ENST00000508465 FIZ1Q96SL8 496 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 CDCA3Q99618 268 aaPredicted RBP4.91□□□□□ -1.62
NUP54-206ENST00000508465 CPPED1Q9BRF8 314 aaPredicted RBP4.91□□□□□ -1.62
NUP54-206ENST00000508465 MSTO1Q9BUK6 570 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 EPC1Q9H2F5 836 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 BLZF1Q9H2G9 400 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 PCIF1Q9H4Z3 704 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 MRPL44Q9H9J2 332 aaKnown RBP4.91□□□□□ -1.62
NUP54-206ENST00000508465 C17orf75Q9HAS0 396 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 ACSS2Q9NR19 701 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 PANK4Q9NVE7 773 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 KCND2Q9NZV8 630 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 LARSQ9P2J5 1176 aaKnown RBP4.91□□□□□ -1.62
NUP54-206ENST00000508465 DNAI1Q9UI46 699 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 ADAM28Q9UKQ2 775 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 ODF2LQ9ULJ1 636 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 RALGAPA2Q2PPJ7 1873 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 TTC28Q96AY4 2481 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 PHLPP2Q6ZVD8 1323 aa4.91□□□□□ -1.62
NUP54-206ENST00000508465 ATG2AQ2TAZ0 1938 aa4.9□□□□□ -1.62
NUP54-206ENST00000508465 CCDC195A0A1B0GUA6 201 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 A0A1B0GVL5 298 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 GOLGA8IPA6NC78 632 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 GOLGA8JA6NMD2 632 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 PPEF2O14830 753 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 HNRNPDLO14979 420 aaKnown RBP4.9□□□□□ -1.63
NUP54-206ENST00000508465 OGTO15294 1046 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 MTSS1O43312 755 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 PPP6R2O75170 966 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 RFPL2O75678 378 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 KRT37O76014 449 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 STK10O94804 968 aaKnown RBP4.9□□□□□ -1.63
NUP54-206ENST00000508465 PRPF6O94906 941 aaKnown RBP4.9□□□□□ -1.63
NUP54-206ENST00000508465 GCNT3O95395 438 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 YEATS4O95619 227 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 URODP06132 367 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 CLTAP09496 248 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 KCNE1P15382 129 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 TKTP29401 623 aaKnown RBP4.9□□□□□ -1.63
NUP54-206ENST00000508465 ADSSP30520 456 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 OR1D2P34982 312 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 HOXD13P35453 343 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 GLUD2P49448 558 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 CLCN4P51793 760 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 ARPP19P56211 112 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 GTF2BQ00403 316 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 DSG1Q02413 1049 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 MCL1Q07820 350 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 UPP1Q16831 310 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 TMEM177Q53S58 311 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 XKR4Q5GH76 650 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 ADALQ6DHV7 355 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 CES5AQ6NT32 575 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 FUT10Q6P4F1 479 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 TMEM184AQ6ZMB5 413 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 SYCP3Q8IZU3 236 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 IQUBQ8NA54 791 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 SMRP1Q8NCR6 262 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 LNX1Q8TBB1 728 aaPredicted RBP4.9□□□□□ -1.63
NUP54-206ENST00000508465 LEO1Q8WVC0 666 aaPredicted RBP4.9□□□□□ -1.63
NUP54-206ENST00000508465 SUSD6Q92537 303 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 CASP10Q92851 521 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 SAAL1Q96ER3 474 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 SNX27Q96L92 541 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 ACCSQ96QU6 501 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 TUBGCP5Q96RT8 1024 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 CLSTN3Q9BQT9 956 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 FAM213AQ9BRX8 229 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 HERC2P3Q9BVR0 1158 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 STRA6Q9BX79 667 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 SLC46A2Q9BY10 475 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 KCNH6Q9H252 994 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 POMKQ9H5K3 350 aa4.9□□□□□ -1.63
NUP54-206ENST00000508465 RPF1Q9H9Y2 349 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms