RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 KCTD17Q8N5Z5 321 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 BHLHE22Q8NFJ8 381 aaPredicted RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 ZC3H15Q8WU90 426 aaKnown RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 PFDN4Q9NQP4 134 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 PIGVQ9NUD9 493 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 ARFGEF1Q9Y6D6 1849 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 CROCCQ5TZA2 2017 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 C3orf70A6NLC5 250 aaPredicted RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 SRRM3A6NNA2 597 aaPredicted RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 PMLP29590 882 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 PBX3P40426 434 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 GRIA4P48058 902 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 MRPS35P82673 323 aaKnown RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 FAM117BQ6P1L5 589 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 EFHBQ8N7U6 833 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 RAET1EQ8TD07 263 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 ZFYVE28Q9HCC9 887 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 OR12D3Q9UGF7 316 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 FAM50BQ9Y247 325 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 ZNF711Q9Y462 761 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 MTF2Q9Y483 593 aaPredicted RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 PTGDR2Q9Y5Y4 395 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 ATXN2Q99700 1313 aaKnown RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 MOXD2PA6NHM9 499 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 AURKAO14965 403 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 SCNN1GP51170 649 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 RTP1P59025 263 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 PDAP1Q13442 181 aaKnown RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 GRM3Q14832 879 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 ARL13AQ5H913 290 aaPredicted RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 CXCL17Q6UXB2 119 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 DNAJC14Q6Y2X3 702 aaPredicted RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.79□□□□□ -0.84
PHF3-208ENST00000506783 INPP5DQ92835 1189 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 SLCO2A1Q92959 643 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 CERS2Q96G23 380 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 ZNF333Q96JL9 665 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 FCRL3Q96P31 734 aaPredicted RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 TRPC7Q9HCX4 862 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 BATF3Q9NR55 127 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 ARHGEF4Q9NR80 690 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 LRCH1Q9Y2L9 728 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 DTNAQ9Y4J8 743 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 RNASEH1O60930 286 aaKnown RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 UGT1A6P19224 532 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 CALRP27797 417 aaKnown RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 L1CAMP32004 1257 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 PLOD1Q02809 727 aaPredicted RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 KCTD21Q4G0X4 260 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 ESRP1Q6NXG1 681 aaKnown RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 NAPRTQ6XQN6 538 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 TRIM42Q8IWZ5 723 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 ST13P4Q8IZP2 240 aaPredicted RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 MIPOL1Q8TD10 442 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 ZNF483Q8TF39 744 aaPredicted RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 NXNL1Q96CM4 212 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 SEPHS2Q99611 448 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 NMRAL1Q9HBL8 299 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 NT5MQ9NPB1 228 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 XPR1Q9UBH6 696 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 PCDHGB4Q9UN71 923 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 PCDHGB5Q9Y5G0 923 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 ZNFX1Q9P2E3 1918 aaKnown RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 TBX18O95935 607 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 LYNP07948 512 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 TPD52P55327 224 aaPredicted RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 TNFAIP2Q03169 654 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 SOX4Q06945 474 aaPredicted RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 CDC16Q13042 620 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 SLC9A4Q6AI14 798 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 TMC7Q7Z402 723 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 MYO1HQ8N1T3 1032 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 SIGLEC10Q96LC7 697 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 TMEM134Q9H6X4 195 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 FBRSL1Q9HCM7 1045 aaKnown RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 AFF4Q9UHB7 1163 aaKnown RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 STAP1Q9ULZ2 295 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 LZTS1Q9Y250 596 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 BTRCQ9Y297 605 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 ACTL7BQ9Y614 415 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 LAMB1P07942 1786 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 TSPAN1O60635 241 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 SLC25A27O95847 323 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 PCNAP12004 261 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 SPRP35270 261 aaPredicted RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 AP3M2P53677 418 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 CDH15P55291 814 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 KCNJ11Q14654 390 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 WASHC2DQ5SRD0 308 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 OTUD3Q5T2D3 398 aaPredicted RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 LRRC38Q5VT99 294 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 TSHZ1Q6ZSZ6 1077 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 CHST15Q7LFX5 561 aaPredicted RBP9.78□□□□□ -0.84
PHF3-208ENST00000506783 MILR1Q7Z6M3 343 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
PHF3-208ENST00000506783 DNERQ8NFT8 737 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 URGCPQ8TCY9 931 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 TMEM40Q8WWA1 233 aa9.78□□□□□ -0.84
PHF3-208ENST00000506783 MPP4Q96JB8 637 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms