RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 OR2T3Q8NH03 318 aa18.31■□□□□ 0.52
SMN1-204ENST00000506163 FRS2Q8WU20 508 aa18.31■□□□□ 0.52
SMN1-204ENST00000506163 PTPRN2Q92932 1015 aa18.31■□□□□ 0.52
SMN1-204ENST00000506163 NUP85Q9BW27 656 aa18.31■□□□□ 0.52
SMN1-204ENST00000506163 MRPL47Q9HD33 250 aaKnown RBP18.31■□□□□ 0.52
SMN1-204ENST00000506163 VPS28Q9UK41 221 aa18.31■□□□□ 0.52
SMN1-204ENST00000506163 RAB23Q9ULC3 237 aa18.31■□□□□ 0.52
SMN1-204ENST00000506163 CYP8B1Q9UNU6 501 aa18.31■□□□□ 0.52
SMN1-204ENST00000506163 ILVBLA1L0T0 632 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 K7ERQ8 282 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 LRCH4O75427 683 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 ZMPSTE24O75844 475 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 RHOQP17081 205 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 IL1R2P27930 398 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 PMS2CLQ68D20 193 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.3■□□□□ 0.52
SMN1-204ENST00000506163 METTL3Q86U44 580 aaKnown RBP18.3■□□□□ 0.52
SMN1-204ENST00000506163 CPNE8Q86YQ8 564 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 TBC1D31Q96DN5 1066 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 SIPA1Q96FS4 1042 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 FAM129BQ96TA1 746 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 MUC3BQ9H195 1237 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 NOL6Q9H6R4 1146 aaKnown RBP18.3■□□□□ 0.52
SMN1-204ENST00000506163 NHEJ1Q9H9Q4 299 aaPredicted RBP18.3■□□□□ 0.52
SMN1-204ENST00000506163 ITM2CQ9NQX7 267 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 SPTLC3Q9NUV7 552 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 USP36Q9P275 1121 aaKnown RBP18.3■□□□□ 0.52
SMN1-204ENST00000506163 NCDNQ9UBB6 729 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 SUN2Q9UH99 717 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 VPS51Q9UID3 782 aa18.3■□□□□ 0.52
SMN1-204ENST00000506163 CHD5Q8TDI0 1954 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 RETP07949 1114 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 ACVRL1P37023 503 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 VASPP50552 380 aaPredicted RBP18.29■□□□□ 0.52
SMN1-204ENST00000506163 TPMTP51580 245 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 ST8SIA6P61647 398 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 RPS14P62263 151 aaKnown RBP18.29■□□□□ 0.52
SMN1-204ENST00000506163 SULT2A1Q06520 285 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 CCDC6Q16204 474 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 EFHC2Q5JST6 749 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 C6orf118Q5T5N4 469 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 TMEFF1Q8IYR6 380 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 DEFB119Q8N690 84 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 MRFAP1L1Q96HT8 127 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 SNRNP25Q9BV90 132 aaKnown RBP18.29■□□□□ 0.52
SMN1-204ENST00000506163 TMEM248Q9NWD8 314 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 ZNHIT6Q9NWK9 470 aaKnown RBP18.29■□□□□ 0.52
SMN1-204ENST00000506163 DNAI1Q9UI46 699 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 ACTL7AQ9Y615 435 aa18.29■□□□□ 0.52
SMN1-204ENST00000506163 ZBTB24O43167 697 aaPredicted RBP18.28■□□□□ 0.52
SMN1-204ENST00000506163 SMAD6O43541 496 aaKnown RBP18.28■□□□□ 0.52
SMN1-204ENST00000506163 ATP9BO43861 1147 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 CREB3O43889 395 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 CD160O95971 181 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 TPM1P09493 284 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 PTGER3P43115 390 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 AIF1P55008 147 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 GNA12Q03113 381 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 SPEM2Q0P670 501 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 ERMARDQ5T6L9 678 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 TXNRD3NBQ6F5E7 133 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 LINGO4Q6UY18 593 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 CNGA4Q8IV77 575 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 PRCCQ92733 491 aaPredicted RBP18.28■□□□□ 0.52
SMN1-204ENST00000506163 LOXL4Q96JB6 756 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 KCTD15Q96SI1 283 aaPredicted RBP18.28■□□□□ 0.52
SMN1-204ENST00000506163 HINFPQ9BQA5 517 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 RSPH9Q9H1X1 276 aaPredicted RBP18.28■□□□□ 0.52
SMN1-204ENST00000506163 ARRDC1-AS1Q9H2J1 176 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 ANAPC7Q9UJX3 599 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 GMEB2Q9UKD1 530 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 USP18Q9UMW8 372 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 AP4E1Q9UPM8 1137 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 RALGAPA1Q6GYQ0 2036 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 NUP205Q92621 2012 aa18.28■□□□□ 0.52
SMN1-204ENST00000506163 AKR1B10O60218 316 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 ZNF217O75362 1048 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 EPN2O95208 641 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 SRCP12931 536 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 EPHB2P29323 1055 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 DLG2Q15700 870 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 STK40Q8N2I9 435 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 SH2D3CQ8N5H7 860 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 DCAF4L2Q8NA75 395 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 PPP1R9BQ96SB3 815 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 SPON2Q9BUD6 331 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 ACE2Q9BYF1 805 aaPredicted RBP18.27■□□□□ 0.52
SMN1-204ENST00000506163 SMOC1Q9H4F8 434 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 WSB2Q9NYS7 404 aaPredicted RBP18.27■□□□□ 0.52
SMN1-204ENST00000506163 HS3ST2Q9Y278 367 aa18.27■□□□□ 0.52
SMN1-204ENST00000506163 DMXL1Q9Y485 3027 aa18.27■□□□□ 0.51
SMN1-204ENST00000506163 EDDM13A0A1B0GTR0 161 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 TARSL2A2RTX5 802 aaKnown RBP18.26■□□□□ 0.51
SMN1-204ENST00000506163 MAP3K13O43283 966 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 ZNF821O75541 412 aaPredicted RBP18.26■□□□□ 0.51
SMN1-204ENST00000506163 RNF8O76064 485 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 RHOBTB1O94844 696 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 IGLV3-19P01714 112 aa18.26■□□□□ 0.51
SMN1-204ENST00000506163 PCK1P35558 622 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms