RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 CCM2LQ9NUG4 571 aaPredicted RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 AP5S1Q9NUS5 200 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 NMRK1Q9NWW6 199 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 COA4Q9NYJ1 87 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 KIF17Q9P2E2 1029 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 DNMT3LQ9UJW3 386 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 GDAQ9Y2T3 454 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 TMX2Q9Y320 296 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 NUBP2Q9Y5Y2 271 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 PCNTO95613 3336 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 TEX51A0A1B0GUA7 166 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 M0R3H8 397 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MAGEB2O15479 319 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RANBP6O60518 1105 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SUPT3HO75486 399 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 LEFTY1O75610 366 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CNMDO75829 334 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 LARGE1O95461 756 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KRT16P08779 473 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CLTAP09496 248 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CDH2P19022 906 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TGM1P22735 817 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ITGA6P23229 1130 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SLC7A1P30825 629 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ALDH1A3P47895 512 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 POU3F4P49335 361 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PPATQ06203 517 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ZBTB17Q13105 803 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SNTA1Q13424 505 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CCINQ13939 588 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 EFTUD2Q15029 972 aaKnown RBP eCLIP2.33□□□□□ -2.042e-7■■■■□ 21.3
NEDD4-205ENST00000506154 PPP1R7Q15435 360 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MED22Q15528 200 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 WSCD2Q2TBF2 565 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MINDY4Q4G0A6 757 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PM20D1Q6GTS8 502 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 LETMD1Q6P1Q0 360 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RNF111Q6ZNA4 994 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 C12orf56Q8IXR9 622 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CCDC36Q8IYA8 594 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 HIPK4Q8NE63 616 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MDM1Q8TC05 714 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PRCCQ92733 491 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RAD51AP1Q96B01 352 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 HHIPL1Q96JK4 782 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 XPO6Q96QU8 1125 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 COLEC11Q9BWP8 271 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 OR51B5Q9H339 312 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MROH8Q9H579 483 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SLC32A1Q9H598 525 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 UBN1Q9NPG3 1134 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 USP40Q9NVE5 1235 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 BTBD7Q9P203 1132 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 UVRAGQ9P2Y5 699 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ZNRF3Q9ULT6 936 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NOP56O00567 594 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SOX1O00570 391 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 FCHO1O14526 889 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ATXN7O15265 892 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PRAMEF1O95521 474 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ITGBL1O95965 494 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 HNRNPA1P09651 372 aaKnown RBP eCLIP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 THBS2P35442 1172 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 AFMP43652 599 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ETV1P50549 477 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CACNA2D1P54289 1103 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ALDH18A1P54886 795 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ADARP55265 1226 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TMPRSS3P57727 454 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MAPKAPK3Q16644 382 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TJAP1Q5JTD0 557 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 FAM209BQ5JX69 171 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 INTS11Q5TA45 600 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PSAPL1Q6NUJ1 521 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TUBA3EQ6PEY2 450 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 VN1R5Q7Z5H4 357 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RASGRP3Q8IV61 690 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CCDC103Q8IW40 242 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 C11orf44Q8N8P7 122 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KLHDC7BQ96G42 594 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 C7orf26Q96N11 449 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NACC1Q96RE7 527 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PRR14Q9BWN1 585 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 HEMGNQ9BXL5 484 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 WNT8AQ9H1J5 351 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SLC25A18Q9H1K4 315 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 IPPKQ9H8X2 491 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ZMAT3Q9HA38 289 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KCNK12Q9HB15 430 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ATP13A2Q9NQ11 1180 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KCNK4Q9NYG8 393 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 EIF3KQ9UBQ5 218 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 FBLN5Q9UBX5 448 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CNOT8Q9UFF9 292 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CCNL1Q9UK58 526 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SAMM50Q9Y512 469 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 FLT1P17948 1338 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 DENND4AQ7Z401 1863 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PRR5-ARHGAP8B1AHC4 643 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms