RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 DEF8Q6ZN54 512 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 CYB5R4Q7L1T6 521 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 BRSK2Q8IWQ3 736 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 USP38Q8NB14 1042 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 TUBB6Q9BUF5 446 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 FRMD8Q9BZ67 464 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 ZNF304Q9HCX3 659 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 Q9N2J8 555 aa4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 PAPOLBQ9NRJ5 636 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 LRRFIP2Q9Y608 721 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-204ENST00000505804 F8W810 466 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 RHODO00212 210 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 PRPF4O43172 522 aaKnown RBP eCLIP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 CCNT1O60563 726 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 METTL18O95568 372 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 FCGR2AP12318 317 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 TNNT1P13805 278 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 KLRC2P26717 231 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 CHRNA5P30532 468 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 STAT1P42224 750 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 MMP13P45452 471 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 BYSLQ13895 437 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 AP5B1Q2VPB7 878 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 C10orf25Q5T742 122 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 MAP3K21Q5TCX8 1036 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 LRIG3Q6UXM1 1119 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 ZNF793Q6ZN11 406 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 BBS12Q6ZW61 710 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 B4GALNT4Q76KP1 1039 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 GALNT7Q86SF2 657 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 ANKRD13BQ86YJ7 626 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 USP13Q92995 863 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 EME1Q96AY2 570 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 RNFT2Q96EX2 444 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 SPRTNQ9H040 489 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 STN1Q9H668 368 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 TMEM160Q9NX00 188 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 TRNAU1APQ9NX07 287 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 CD207Q9UJ71 328 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 GTF2A1LQ9UNN4 478 aa4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 COL3A1P02461 1466 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-204ENST00000505804 KIR2DS5A0A0G2JLQ3 304 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 A0A1W2PPC1 479 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 C17orf100A8MU93 164 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 KIR2DS3K7RE56 304 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 PEX12O00623 359 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 TSPAN3O60637 253 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 NEURL1O76050 574 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 HLA-DQA2P01906 255 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 WEE2P0C1S8 567 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 CYP2J2P51589 502 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 PMPCAQ10713 525 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 KLF9Q13886 244 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 ETFDHQ16134 617 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 PLK5Q496M5 336 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 WDR45BQ5MNZ6 344 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 ATG16L1Q676U5 607 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 LVRNQ6Q4G3 990 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 SHC4Q6S5L8 630 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 NANOGP1Q8N7R0 232 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 C16orf52Q8NHV5 167 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 RPL36ALQ969Q0 106 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 COQ8BQ96D53 544 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 CADM1Q9BY67 442 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 SLC29A3Q9BZD2 475 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 TUBA8Q9NY65 449 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 IFT80Q9P2H3 777 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 AGO2Q9UKV8 859 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 GDAQ9Y2T3 454 aa4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 TTBK1Q5TCY1 1321 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-204ENST00000505804 ZMYM2Q9UBW7 1377 aa4.4□□□□□ -1.7
TOPBP1-204ENST00000505804 FOXO6A8MYZ6 492 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 CNOT3O75175 753 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 TOP3BO95985 862 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 AGR2O95994 175 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 HNF1BP35680 557 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 MTNR1AP48039 350 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 TLE2Q04725 743 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 GOLGA8FQ08AF8 430 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 MTX1Q13505 466 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 IL13RA2Q14627 380 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 RABEP1Q15276 862 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 RBMS2Q15434 407 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 SMTNL2Q2TAL5 461 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 PIK3CD-AS1Q5SR53 167 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 TTC39AQ5SRH9 613 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 VWA5B1Q5TIE3 1220 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 FAM171A1Q5VUB5 890 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 ISM2Q6H9L7 571 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 NAPEPLDQ6IQ20 393 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 HMBOX1Q6NT76 420 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 CCDC25Q86WR0 208 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 TMTC1Q8IUR5 882 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 DDIASQ8IXT1 998 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 SCAIQ8N9R8 606 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 SLC44A5Q8NCS7 719 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms