RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 CAMK2AQ9UQM7 478 aa5.39□□□□□ -1.55
TRAPPC13-205ENST00000504243 PKP3Q9Y446 797 aa5.39□□□□□ -1.55
TRAPPC13-205ENST00000504243 CYP46A1Q9Y6A2 500 aa5.39□□□□□ -1.55
TRAPPC13-205ENST00000504243 SPATA31A5Q5VU36 1347 aa5.39□□□□□ -1.55
TRAPPC13-205ENST00000504243 SPATA31A7Q8IWB4 1347 aa5.39□□□□□ -1.55
TRAPPC13-205ENST00000504243 DPPA5A6NC42 116 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 LRRC3CA6NJW4 275 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 MSI1O43347 362 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 RTN3O95197 1032 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 CD63P08962 238 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 HNF1BP35680 557 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 GPD2P43304 727 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 CDH15P55291 814 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 CAMK1Q14012 370 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 PROSER3Q2NL68 480 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 NAA35Q5VZE5 725 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 MIS18BP1Q6P0N0 1132 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 RBM44Q6ZP01 1051 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 MDGA2Q7Z553 956 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 ARMC8Q8IUR7 673 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 GHDCQ8N2G8 530 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 RFWD2Q8NHY2 731 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 TBC1D22AQ8WUA7 517 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 IP6K1Q92551 441 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 CNOT9Q92600 299 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 C5orf34Q96MH7 638 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 EYA3Q99504 573 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 MPHOSPH8Q99549 860 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 TM2D2Q9BX73 214 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 NPLQ9BXD5 320 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 TTYH1Q9H313 450 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 TTC12Q9H892 705 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 PTGFRNQ9P2B2 879 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 AASSQ9UDR5 926 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 CD207Q9UJ71 328 aa5.38□□□□□ -1.55
TRAPPC13-205ENST00000504243 CXorf65A6NEN9 183 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 PLAUP00749 431 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 CD72P21854 359 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 CD38P28907 300 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 TYK2P29597 1187 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 CIITAP33076 1130 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 SKIV2L2P42285 1042 aaKnown RBP5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 CYP2J2P51589 502 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 NHLH1Q02575 133 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 SIM2Q14190 667 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 SEC23BQ15437 767 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 BAK1Q16611 211 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 CCDC30Q5VVM6 783 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 DSTYKQ6XUX3 929 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 CYB5R4Q7L1T6 521 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 ZNF366Q8N895 744 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 TNIP2Q8NFZ5 429 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 IFT27Q9BW83 186 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 PHF7Q9BWX1 381 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 AGXT2Q9BYV1 514 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 TMX4Q9H1E5 349 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 SLC32A1Q9H598 525 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 ERVK-5Q9HDB9 667 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 DTX4Q9Y2E6 619 aa5.37□□□□□ -1.55
TRAPPC13-205ENST00000504243 A0A1W2PPH5 198 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 SLC22A23A1A5C7 686 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 MANSC4A6NHS7 340 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 B4E171 279 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 C1QL1O75973 258 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 HLA-DQA2P01906 255 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 FCGR2AP12318 317 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 RPS6KB1P23443 525 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 KLRC2P26717 231 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 CHRNA5P30532 468 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 TSPAN7P41732 249 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 STAT1P42224 750 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 SOX2P48431 317 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 KRT32Q14532 448 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 HAUS3Q68CZ6 603 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 DPY19L2P1Q6NXN4 242 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 SYCE2Q6PIF2 218 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 ZNF474Q6S9Z5 364 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 R3HCC1LQ7Z5L2 792 aaKnown RBP5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 TMEM217Q8N7C4 229 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 LSM14AQ8ND56 463 aaKnown RBP5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 DNAAF1Q8NEP3 725 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 OR52N4Q8NGI2 321 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 FUZQ9BT04 418 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 SCNM1Q9BWG6 230 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 SLC25A18Q9H1K4 315 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 SLC22A11Q9NSA0 550 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 TMEM248Q9NWD8 314 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 IL1RAPL1Q9NZN1 696 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 UPB1Q9UBR1 384 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 CNPY2Q9Y2B0 182 aa5.36□□□□□ -1.55
TRAPPC13-205ENST00000504243 AOX1Q06278 1338 aa5.35□□□□□ -1.55
TRAPPC13-205ENST00000504243 ITIH6Q6UXX5 1313 aa5.35□□□□□ -1.55
TRAPPC13-205ENST00000504243 CYP2D7A0A087X1C5 515 aa5.35□□□□□ -1.55
TRAPPC13-205ENST00000504243 FAM90A7PA6NKC0 464 aa5.35□□□□□ -1.55
TRAPPC13-205ENST00000504243 FAM90A22PA8MWA6 464 aa5.35□□□□□ -1.55
TRAPPC13-205ENST00000504243 FAM90A12PA8MX19 464 aa5.35□□□□□ -1.55
TRAPPC13-205ENST00000504243 FAM90A23PA8MXZ1 464 aa5.35□□□□□ -1.55
TRAPPC13-205ENST00000504243 OVOL3O00110 214 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms