RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ACTN1P12814 892 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 KLRC2P26717 231 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GCAP28676 217 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 EPHB2P29323 1055 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GGT5P36269 586 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SLC1A4P43007 532 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 MAGEA10P43363 369 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 POLD2P49005 469 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CLCNKBP51801 687 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 NUBP1P53384 320 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GOLGA8FQ08AF8 430 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 NSUN2Q08J23 767 aaKnown RBP eCLIP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GOLGA8DPQ0D2H9 430 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 MAPRE1Q15691 268 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ZC2HC1CQ53FD0 456 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SPRYD7Q5W111 196 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 USP17L2Q6R6M4 530 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF804AQ7Z570 1209 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SRRM1Q8IYB3 904 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PQLC1Q8N2U9 271 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 METTL13Q8N6R0 699 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ANKRD13CQ8N6S4 541 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TTC13Q8NBP0 860 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 APOBEC4Q8WW27 367 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 LINC01599Q8WXQ3 324 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 RAD54LQ92698 747 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TOP1MTQ969P6 601 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ERLEC1Q96DZ1 483 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 HSFY1Q96LI6 401 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PHF12Q96QT6 1004 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 LRRC2Q9BYS8 371 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GBA3Q9H227 469 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 EHD1Q9H4M9 534 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SYNDIG1Q9H7V2 258 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 C12orf10Q9HB07 376 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 USP29Q9HBJ7 922 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GPHNQ9NQX3 736 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ZC4H2Q9NQZ6 224 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FBXO9Q9UK97 447 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CHKBQ9Y259 395 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 MYRFQ9Y2G1 1151 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SNX24Q9Y343 169 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 A0A087WWV3 80 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PNMA8CA0A1B0GUJ8 204 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TRAF5O00463 557 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 MTSS1O43312 755 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TIMM44O43615 452 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SORBS3O60504 671 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CTSAP10619 480 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ANPEPP15144 967 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ATF2P15336 505 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FGFR3P22607 806 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 JAK1P23458 1154 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 HK2P52789 917 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TUBB3Q13509 450 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 KIAA0040Q15053 153 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PGM5Q15124 567 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ABCB5Q2M3G0 1257 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 IQSEC1Q6DN90 963 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 DSTYKQ6XUX3 929 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 LPCAT2Q7L5N7 544 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GPR141Q7Z602 305 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ZSWIM9Q86XI8 627 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TTC5Q8N0Z6 440 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PDIK1LQ8N165 341 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TMEM102Q8N9M5 508 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FAM172AQ8WUF8 416 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 RMND5BQ96G75 393 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GPR101Q96P66 508 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TUBA1CQ9BQE3 449 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 RTP3Q9BQQ7 232 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 AIFM2Q9BRQ8 373 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 HIPK3Q9H422 1215 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TRABDQ9H4I3 376 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CLK4Q9HAZ1 481 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PSMC3IPQ9P2W1 217 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TAGLN3Q9UI15 199 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SALL4Q9UJQ4 1053 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 A0A087X0T9 212 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 ILVBLA1L0T0 632 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 FAM172BPA6NC97 362 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 ITM2AO43736 263 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 BAG2O95816 211 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 FAM228BP0C875 321 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 PSMC3P17980 439 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 CTGFP29279 349 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 NUDT1P36639 197 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 TUFMP49411 452 aaKnown RBP2.84□□□□□ -1.95
NEDD4-204ENST00000503468 EFNB1P98172 346 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 WASHC5Q12768 1159 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 CAMK2BQ13554 666 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 ZBED5Q49AG3 693 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 HSF5Q4G112 596 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-204ENST00000503468 AASDHQ4L235 1098 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-204ENST00000503468 KHDC1Q4VXA5 237 aaKnown RBP2.84□□□□□ -1.95
NEDD4-204ENST00000503468 CEP78Q5JTW2 689 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 CCNJQ5T5M9 372 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 RNLSQ5VYX0 342 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 OGFOD2Q6N063 350 aa2.84□□□□□ -1.95
NEDD4-204ENST00000503468 TRNP1Q6NT89 227 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms