RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 HOXA5P20719 270 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 CCT8P50990 548 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 ZNF84P51523 738 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 EIF3BP55884 814 aaKnown RBP5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 MC1RQ01726 317 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 DMWDQ09019 674 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 ACVR2BQ13705 512 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 PTPAQ15257 358 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 CCDC96Q2M329 555 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 GLE1Q53GS7 698 aaKnown RBP5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 RRM2BQ7LG56 351 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 ZNF804AQ7Z570 1209 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 BCDIN3DQ7Z5W3 292 aaKnown RBP5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 CCDC105Q8IYK2 499 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 PLD5Q8N7P1 536 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 TERB1Q8NA31 727 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 TBC1D5Q92609 795 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 ABHD14AQ9BUJ0 271 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 TRIM2Q9C040 744 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 SLC2A4RGQ9NR83 387 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 PLSCR4Q9NRQ2 329 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 ASNSD1Q9NWL6 643 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 HCFC1R1Q9NWW0 138 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 IL1RAPL1Q9NZN1 696 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 LRIT1Q9P2V4 623 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 HDAC6Q9UBN7 1215 aa5.71□□□□□ -1.5
HMGB1P3-201ENST00000502802 C16orf96A6NNT2 1141 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 EXOC3O60645 756 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 TSPAN9O75954 239 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 SEC14L2O76054 403 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 STARD3NLO95772 234 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 RFPL3SP0C7P2 107 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 ICAM3P32942 547 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 CTCFP49711 727 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 MRPS35P82673 323 aaKnown RBP5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 POU5F1Q01860 360 aaKnown RBP5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 TUBA3CQ13748 450 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 SEMA3AQ14563 771 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 XP32Q5T750 250 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 ERICH6BQ5W0A0 696 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 AADACL2Q6P093 401 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 TMEM81Q6P7N7 255 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 TUBA3EQ6PEY2 450 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 TMEM65Q6PI78 240 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 NAPRTQ6XQN6 538 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 DCDC5Q6ZRR9 648 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 RNF144BQ7Z419 303 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 EXD3Q8N9H8 876 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 KLHL29Q96CT2 875 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 FAM120BQ96EK7 910 aaKnown RBP5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 HIC2Q96JB3 615 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 FYTTD1Q96QD9 318 aaKnown RBP5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 PIP5K1AQ99755 562 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 ASIC5Q9NY37 505 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 PEMTQ9UBM1 199 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 ZNF215Q9UL58 517 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 ST3GAL5Q9UNP4 418 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 TSC22D4Q9Y3Q8 395 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 KCNE2Q9Y6J6 123 aa5.7□□□□□ -1.5
HMGB1P3-201ENST00000502802 C17orf113A0A1B0GUU1 675 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 C17orf100A8MU93 164 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 GCOM1H8Y6P7 765 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 VILLO15195 856 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 CEP104O60308 925 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 ELFN1P0C7U0 828 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 TGM2P21980 687 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 TM4SF1P30408 202 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 AVPR1BP47901 424 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 CPA2P48052 419 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 NLRP5P59047 1200 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 CYP4F2P78329 520 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 CHAF1BQ13112 559 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 KCNB1Q14721 858 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 CDSNQ15517 529 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 FAM133BQ5BKY9 247 aaKnown RBP5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 ZNF667Q5HYK9 610 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 SLC30A9Q6PML9 568 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 MDGA2Q7Z553 956 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 SETD9Q8NE22 299 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 FAM110DQ8TAY7 271 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 ACTRT2Q8TDY3 377 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 HSPH1Q92598 858 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 CELF1Q92879 486 aaKnown RBP5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 PERPQ96FX8 193 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 CCDC17Q96LX7 622 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 KLHL15Q96M94 604 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 COQ10AQ96MF6 247 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 CADM1Q9BY67 442 aaKnown RBP5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 SLC32A1Q9H598 525 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 TMEM248Q9NWD8 314 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 SYBUQ9NX95 663 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 ARL15Q9NXU5 204 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 UPB1Q9UBR1 384 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 LIMA1Q9UHB6 759 aaKnown RBP5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 CORO1CQ9ULV4 474 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 DTX4Q9Y2E6 619 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 SPATA31A5Q5VU36 1347 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 SPATA31A6Q5VVP1 1343 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 SPATA31A7Q8IWB4 1347 aa5.69□□□□□ -1.5
HMGB1P3-201ENST00000502802 AGAP14A8MT82 685 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms