RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 POLGP54098 1239 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 RRADP55042 308 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 CDH15P55291 814 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 RRP1P56182 461 aaKnown RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLC26A5P58743 744 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 GNAI1P63096 354 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 LRRC74AQ0VAA2 488 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 EIF2B5Q13144 721 aaKnown RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 MLANAQ16655 118 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 MST1LQ2TV78 715 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 C2orf76Q3KRA6 126 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZMAT1Q5H9K5 638 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 NAA35Q5VZE5 725 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 OLFM4Q6UX06 510 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ISLR2Q6UXK2 745 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 FAM83HQ6ZRV2 1179 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 PTF1AQ7RTS3 328 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 CCDC186Q7Z3E2 898 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 KRT27Q7Z3Y8 459 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 EGFL6Q8IUX8 553 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 REXO1L1PQ8IX06 675 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ADGRF2Q8IZF7 708 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ANKRD44Q8N8A2 993 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 POC5Q8NA72 575 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 OR7D4Q8NG98 312 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 FIBINQ8TAL6 211 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 LPPQ93052 612 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ELP4Q96EB1 424 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 VPS39Q96JC1 886 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 GPR20Q99678 358 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 NTPCRQ9BSD7 190 aaKnown RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 TEX12Q9BXU0 123 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 INTS2Q9H0H0 1204 aaKnown RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 C1orf21Q9H246 121 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 KAT14Q9H8E8 782 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 BCO1Q9HAY6 547 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZBTB26Q9HCK0 441 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZFP64Q9NPA5 681 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 TLR8Q9NR97 1041 aaKnown RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 SIDT1Q9NXL6 827 aaKnown RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 MOCS1Q9NZB8 636 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 CPSF2Q9P2I0 782 aaKnown RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 NCDNQ9UBB6 729 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 XPR1Q9UBH6 696 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 CACNG4Q9UBN1 327 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLC25A10Q9UBX3 287 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZNF70Q9UC06 446 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 FETUBQ9UGM5 382 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 LIMA1Q9UHB6 759 aaKnown RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 AGAP1Q9UPQ3 857 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 NUDCQ9Y266 331 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 KLHL20Q9Y2M5 609 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 PAXBP1Q9Y5B6 917 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 RBM8AQ9Y5S9 174 aaKnown RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 POMT1Q9Y6A1 747 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 AP1M2Q9Y6Q5 423 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 FPGT-TNNI3KV9GXZ4 949 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 NSD3Q9BZ95 1437 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 NSD2O96028 1365 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 CCDC7Q96M83 1385 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 RGPD5Q99666 1765 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 MEGF6O75095 1541 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 SHANK3Q9BYB0 1731 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 LOC102723971A0A1B0GUV8 181 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 CCDC151A5D8V7 595 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 RFXAPO00287 272 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 DNM1LO00429 736 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 HNRNPCL1O60812 293 aaKnown RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 GUCY1B2O75343 617 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 REC8O95072 547 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 OR2C1O95371 312 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 CER1O95813 267 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 OLFM2O95897 454 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 GASTP01350 101 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 EIF2S1P05198 315 aaKnown RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 MYBL1P10243 752 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 ARP10275 920 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 IL2RBP14784 551 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 PRKCHP24723 683 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 PTAFRP25105 342 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 MCM3P25205 808 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 PBLDP30039 288 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 HOXC9P31274 260 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 MCM7P33993 719 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 HSPA4P34932 840 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 CRHR1P34998 444 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 IL13P35225 146 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 BSGP35613 385 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 NRIP1P48552 1158 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 PTDSS1P48651 473 aaKnown RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 GPC3P51654 580 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 ARFIP1P53367 373 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 HDAC4P56524 1084 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 EIF4A1P60842 406 aaKnown RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 POU6F2P78424 691 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 TMEM115Q12893 351 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 ATP1A4Q13733 1029 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 PCLAFQ15004 111 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 EIF4HQ15056 248 aaKnown RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 WDR43Q15061 677 aaKnown RBP eCLIP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms