RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 EBF1Q9UH73 591 aa17.2■□□□□ 0.34
PRKCB-210ENST00000498739 SLC25A13Q9UJS0 675 aa17.2■□□□□ 0.34
PRKCB-210ENST00000498739 TFR2Q9UP52 801 aa17.2■□□□□ 0.34
PRKCB-210ENST00000498739 CCDC163A0A0D9SF12 145 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 FGF10O15520 208 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-210ENST00000498739 DAPK3O43293 454 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 MTA2O94776 668 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 RARAP10276 462 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 GABRG2P18507 467 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 HTR7P34969 479 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 NNMTP40261 264 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 KRT83P78385 493 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 GNA12Q03113 381 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 ZNF783Q6ZMS7 281 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 RTL3Q8N8U3 475 aaKnown RBP17.19■□□□□ 0.34
PRKCB-210ENST00000498739 PSMB7Q99436 277 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 SPON2Q9BUD6 331 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 C2orf49Q9BVC5 232 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-210ENST00000498739 CD248Q9HCU0 757 aa17.19■□□□□ 0.34
PRKCB-210ENST00000498739 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRKCB-210ENST00000498739 TTC34A8MYJ7 566 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 SNAP91O60641 907 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 LILRB5O75023 590 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 GOT1P17174 413 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 MAN1A1P33908 653 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 NBL1P41271 181 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 ARHGAP25P42331 645 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 NOP2P46087 812 aaKnown RBP17.18■□□□□ 0.34
PRKCB-210ENST00000498739 SRSF5Q13243 272 aaKnown RBP17.18■□□□□ 0.34
PRKCB-210ENST00000498739 DPYSL2Q16555 572 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 IL31Q6EBC2 164 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 RFX8Q6ZV50 586 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 DCAF4L2Q8NA75 395 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 KDM1BQ8NB78 822 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 ACRBPQ8NEB7 543 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 TEKT4Q8WW24 435 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 SLC6A17Q9H1V8 727 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 MTG2Q9H4K7 406 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 ATP13A1Q9HD20 1204 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 SUN2Q9UH99 717 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 VPS51Q9UID3 782 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 SLCO3A1Q9UIG8 710 aa17.18■□□□□ 0.34
PRKCB-210ENST00000498739 WASH4PA8MWX3 477 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 H3BRJ5 948 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 CBX4O00257 560 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 RAMP2O60895 175 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 NDUFV2P19404 249 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 GLDCP23378 1020 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 ACVRL1P37023 503 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 ETFBP38117 255 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 ARL4AP40617 200 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 ZNF135P52742 658 aaPredicted RBP17.17■□□□□ 0.34
PRKCB-210ENST00000498739 TAS2R40P59535 323 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 TCEAL1Q15170 157 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 HNRNPA1L2Q32P51 320 aaKnown RBP17.17■□□□□ 0.34
PRKCB-210ENST00000498739 ARHGEF2Q92974 986 aaKnown RBP17.17■□□□□ 0.34
PRKCB-210ENST00000498739 PHOX2BQ99453 314 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 CWC15Q9P013 229 aaKnown RBP17.17■□□□□ 0.34
PRKCB-210ENST00000498739 REXO2Q9Y3B8 237 aaKnown RBP17.17■□□□□ 0.34
PRKCB-210ENST00000498739 CACNA1IQ9P0X4 2223 aa17.17■□□□□ 0.34
PRKCB-210ENST00000498739 HRO43593 1189 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 RPP40O75818 363 aaKnown RBP17.16■□□□□ 0.34
PRKCB-210ENST00000498739 ERCC2P18074 760 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 CNR2P34972 360 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 COPAP53621 1224 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 CDH6P55285 790 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 CAMK2GQ13555 558 aaPredicted RBP17.16■□□□□ 0.34
PRKCB-210ENST00000498739 KRT81Q14533 505 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 POLD3Q15054 466 aaPredicted RBP17.16■□□□□ 0.34
PRKCB-210ENST00000498739 ACCSLQ4AC99 568 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 ATP13A4Q4VNC1 1196 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 USP39Q53GS9 565 aaKnown RBP17.16■□□□□ 0.34
PRKCB-210ENST00000498739 KIAA1324Q6UXG2 1013 aaKnown RBP17.16■□□□□ 0.34
PRKCB-210ENST00000498739 LINGO4Q6UY18 593 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 ZNF354CQ86Y25 554 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 CACUL1Q86Y37 369 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 ATP11CQ8NB49 1132 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 OR2T3Q8NH03 318 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 MRGPRX1Q96LB2 322 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 MKRN2Q9H000 416 aaKnown RBP17.16■□□□□ 0.34
PRKCB-210ENST00000498739 MAGEH1Q9H213 219 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 PCDH18Q9HCL0 1135 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 PRSS16Q9NQE7 514 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 DONSONQ9NYP3 566 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 INVSQ9Y283 1065 aa17.16■□□□□ 0.34
PRKCB-210ENST00000498739 A0A0A6YYK5 440 aaPredicted RBP17.15■□□□□ 0.34
PRKCB-210ENST00000498739 EDDM13A0A1B0GTR0 161 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 RCCD1A6NED2 376 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 SIN3BO75182 1162 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 KRT7P08729 469 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 HCAR3P49019 387 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 VAV2P52735 878 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 HADHBP55084 474 aaKnown RBP17.15■□□□□ 0.34
PRKCB-210ENST00000498739 ZFYVE27Q5T4F4 411 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 RETSATQ6NUM9 610 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 CEP68Q76N32 757 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 POLNQ7Z5Q5 900 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 KIAA1328Q86T90 577 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 SH2D3CQ8N5H7 860 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 GAB3Q8WWW8 586 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms