RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 EGFLAMQ63HQ2 1017 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 CDPF1Q6NVV7 123 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 KIAA1324Q6UXG2 1013 aaKnown RBP5.83□□□□□ -1.48
SPTA1-209ENST00000498708 SCARA5Q6ZMJ2 495 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 TRAPPC11Q7Z392 1133 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 ZAR1Q86SH2 424 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 ENGASEQ8NFI3 743 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 CADM4Q8NFZ8 388 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 WBP2Q969T9 261 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 JAKMIP2Q96AA8 810 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 CCDC127Q96BQ5 260 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 FUBP3Q96I24 572 aaKnown RBP eCLIP5.83□□□□□ -1.48
SPTA1-209ENST00000498708 VCPIP1Q96JH7 1222 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 LIN7BQ9HAP6 207 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 TMEM30AQ9NV96 361 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 SEL1LQ9UBV2 794 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 ADGRE2Q9UHX3 823 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 CLCA2Q9UQC9 943 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 SH3BP1Q9Y3L3 701 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 NFE2L3Q9Y4A8 694 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 MED13Q9UHV7 2174 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 CSMD2Q7Z408 3487 aa5.83□□□□□ -1.48
SPTA1-209ENST00000498708 F8P00451 2351 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 ZFC3H1O60293 1989 aaKnown RBP5.82□□□□□ -1.48
SPTA1-209ENST00000498708 WASH3PC4AMC7 463 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CYP26A1O43174 497 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 ICMTO60725 284 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CDK4P11802 303 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 PTPN1P18031 435 aaKnown RBP5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CASP1P29466 404 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 EIF2DP41214 584 aaKnown RBP5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CASP4P49662 377 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CCT8P50990 548 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 AFF3P51826 1226 aaKnown RBP5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CDH8P55286 799 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 MYL6P60660 151 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 TNNC1P63316 161 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 GABREP78334 506 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 ASIC1P78348 528 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 SLC7A9P82251 487 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 GAD2Q05329 585 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 ZNF211Q13398 564 aaPredicted RBP5.82□□□□□ -1.48
SPTA1-209ENST00000498708 TRPC3Q13507 836 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 POU4F3Q15319 338 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 SHBQ15464 509 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 SURF1Q15526 300 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 MAPRE1Q15691 268 aaKnown RBP5.82□□□□□ -1.48
SPTA1-209ENST00000498708 KRTAP21-3Q3LHN1 58 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 WDR72Q3MJ13 1102 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 ARL13BQ3SXY8 428 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 C10orf76Q5T2E6 689 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 BTBD8Q5XKL5 378 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 VSTM1Q6UX27 236 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CCDC81Q6ZN84 652 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CCDC73Q6ZRK6 1079 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 DPH6Q7L8W6 267 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 PTRH1Q86Y79 214 aaKnown RBP5.82□□□□□ -1.48
SPTA1-209ENST00000498708 BBS7Q8IWZ6 715 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CCDC65Q8IXS2 484 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 EID2Q8N6I1 236 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 SCAMP5Q8TAC9 235 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 MYCBPAPQ8TBZ2 947 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 IGSF8Q969P0 613 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 FBXO32Q969P5 355 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 DHX58Q96C10 678 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 SPATA17Q96L03 361 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 C8orf48Q96LL4 319 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 SLITRK1Q96PX8 696 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 USP28Q96RU2 1077 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 KCNK16Q96T55 309 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 B3GNT5Q9BYG0 378 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 NACA2Q9H009 215 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 EPN3Q9H201 632 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 BLZF1Q9H2G9 400 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 CCSER2Q9H7U1 834 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 TM9SF3Q9HD45 589 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 ASCL3Q9NQ33 180 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 ITM2CQ9NQX7 267 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 OLFML3Q9NRN5 406 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 RAD18Q9NS91 495 aa5.82□□□□□ -1.48
SPTA1-209ENST00000498708 SRPRBQ9Y5M8 271 aaKnown RBP5.82□□□□□ -1.48
SPTA1-209ENST00000498708 MYH10P35580 1976 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.81□□□□□ -1.48
SPTA1-209ENST00000498708 A0A1B0GTQ1 180 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 FRMD3A2A2Y4 597 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 SLC9A3R1O14745 358 aaPredicted RBP5.81□□□□□ -1.48
SPTA1-209ENST00000498708 MDM4O15151 490 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 PAPSS1O43252 624 aaPredicted RBP5.81□□□□□ -1.48
SPTA1-209ENST00000498708 COCHO43405 550 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 TULP3O75386 442 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 MT-CO3P00414 261 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 OAS1P00973 400 aaKnown RBP5.81□□□□□ -1.48
SPTA1-209ENST00000498708 TCF3P15923 654 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 SYT1P21579 422 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 YWHAQP27348 245 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 TNFRSF8P28908 595 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 HOXD13P35453 343 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 CTSKP43235 329 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 PGFP49763 221 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 PDE6CP51160 858 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms