RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TBC1D3FA6NER0 549 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 SRRM3A6NNA2 597 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 TBC1D3LB9A6J9 549 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 H0Y8X5 98 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 PES1O00541 588 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 KCNK3O14649 394 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 PAGE1O75459 146 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 CLDN11O75508 207 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 TBC1D3HP0C7X1 549 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 ERCC5P28715 1186 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 NUMBP49757 651 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 CENPCQ03188 943 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 RAPGEF1Q13905 1077 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 PTPN20Q4JDL3 420 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 VWA3BQ502W6 1294 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 SLC45A4Q5BKX6 768 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 FAM46CQ5VWP2 391 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 TBC1D3GQ6DHY5 549 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 TBC1D3CQ6IPX1 549 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 CXorf57Q6NSI4 855 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 LAYNQ6UX15 382 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 SLCO6A1Q86UG4 719 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 FAM71AQ8IYT1 594 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 TBC1D3Q8IZP1 549 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 AADATQ8N5Z0 425 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 MSANTD4Q8NCY6 345 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 ZNF397Q8NF99 534 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 BAHD1Q8TBE0 780 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 OR8D1Q8WZ84 308 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 ORAI3Q9BRQ5 295 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 FEM1AQ9BSK4 669 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 SIK2Q9H0K1 926 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 WDCPQ9H6R7 721 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 PLCB1Q9NQ66 1216 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 VPS28Q9UK41 221 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 HS3ST4Q9Y661 456 aa12.1□□□□□ -0.47
NUDCD3-211ENST00000497978 CEP295Q9C0D2 2601 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 TMEM131Q92545 1883 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 GOLGA8CPA6NN73 597 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 C1QTNF3-AMACRE9PGA6 284 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 SLC7A4O43246 635 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 TNFSF14O43557 240 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 F9P00740 461 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 ATXN1LP0C7T5 689 aaKnown RBP12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 PNMA6AP0CW24 399 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 ZNF18P17022 549 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 CD38P28907 300 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 SULT1E1P49888 294 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 ADPRHP54922 357 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 CDH4P55283 916 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 RNASE9P60153 205 aaKnown RBP12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 KRT83P78385 493 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 DRAP1Q14919 205 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 KCNT1Q5JUK3 1230 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 BRMS1LQ5PSV4 323 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 ACBD5Q5T8D3 534 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 LRRC31Q6UY01 552 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 CCNI2Q6ZMN8 369 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 FRS2Q8WU20 508 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 C18orf8Q96DM3 657 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 SERAC1Q96JX3 654 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 MUC3BQ9H195 1237 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 AJAP1Q9UKB5 411 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 BTBD3Q9Y2F9 522 aa12.09□□□□□ -0.47
NUDCD3-211ENST00000497978 NYNRINQ9P2P1 1898 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 KNL1Q8NG31 2342 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 A0A1B0GTQ1 180 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 ALOX15BO15296 676 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 YKT6O15498 198 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 ATP9BO43861 1147 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 VAV1P15498 845 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 CYP11B1P15538 503 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 NUDT1P36639 197 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 SCNN1AP37088 669 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 CXCR3P49682 368 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 IL9RQ01113 521 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 DEUP1Q05D60 604 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 SCAPQ12770 1279 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 KCNJ12Q14500 433 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 DLG2Q15700 870 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 DPCR1Q3MIW9 517 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 C5orf22Q49AR2 442 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 HSP90AA4PQ58FG1 418 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 MIIPQ5JXC2 388 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 PRPF39Q86UA1 669 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 ERICH1Q86X53 443 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 GALNT15Q8N3T1 639 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 ALG14Q96F25 216 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 CCDC114Q96M63 670 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 NPY6RQ99463 290 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 ELF4Q99607 663 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 TKTL2Q9H0I9 626 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 GDF3Q9NR23 364 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 PIGVQ9NUD9 493 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms