RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PMM2O15305 246 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 LTFP02788 710 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 ARSAP15289 507 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 CCNA2P20248 432 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 RAD23AP54725 363 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 SEL1L3Q68CR1 1132 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 CHSY3Q70JA7 882 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 IL31RAQ8NI17 732 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 HM13Q8TCT9 377 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 ZC3H15Q8WU90 426 aaKnown RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 CCDC17Q96LX7 622 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 EBNA1BP2Q99848 306 aaKnown RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 CDCA7Q9BWT1 371 aaPredicted RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 NPLQ9BXD5 320 aaPredicted RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 EHMT1Q9H9B1 1298 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 GNPTGQ9UJJ9 305 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 USP18Q9UMW8 372 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 HES2Q9Y543 173 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 V9GYQ6 96 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 GAKO14976 1311 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 IQCA1LA6NCM1 817 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 E7ENX8 843 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 PFDN6O15212 129 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 HMGCRP04035 888 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 GRIA3P42263 894 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 PSME3P61289 254 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 MOGQ16653 247 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 SMUG1Q53HV7 270 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 GLRA4Q5JXX5 417 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 DENND1BQ6P3S1 775 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 RP9Q8TA86 221 aaKnown RBP13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 CNDP1Q96KN2 507 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 EFHD1Q9BUP0 239 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 DCDC2Q9UHG0 476 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 ZNF229Q9UJW7 825 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 CNOT6Q9ULM6 557 aaKnown RBP13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 ERGIC3Q9Y282 383 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 ABCA3Q99758 1704 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 CLOCKO15516 846 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 MYO1DO94832 1006 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 PIGNO95427 931 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 METTL18O95568 372 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 SPP2Q13103 211 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 IL31Q6EBC2 164 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 TFAP2BQ92481 460 aa13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 ILKAPQ9H0C8 392 aaPredicted RBP13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 NOL6Q9H6R4 1146 aaKnown RBP13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 NGRNQ9NPE2 291 aaKnown RBP13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 MYO18AQ92614 2054 aaKnown RBP13.32□□□□□ -0.28
GAPVD1-220ENST00000497580 TRIM38O00635 465 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 GRM5P41594 1212 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 DPYSQ14117 519 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 CADM3Q8N126 398 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 KCTD17Q8N5Z5 321 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 PDZD8Q8NEN9 1154 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 TRPC4APQ8TEL6 797 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 SREK1Q8WXA9 508 aaKnown RBP13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 TANKQ92844 425 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 ZNF668Q96K58 619 aaPredicted RBP13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 PNPLA8Q9NP80 782 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 FAM159BA6NKW6 160 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 KRT75O95678 551 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 JUNP05412 331 aaKnown RBP13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 GABRB3P28472 473 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 JAG1P78504 1218 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 IRF9Q00978 393 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 NFATC3Q12968 1075 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 NOMO1Q15155 1222 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 DGKDQ16760 1214 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 C15orf59Q2T9L4 293 aaPredicted RBP13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 TIGD2Q4W5G0 525 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 FAM47CQ5HY64 1035 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 PIWIL3Q7Z3Z3 882 aaKnown RBP13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 ITPKCQ96DU7 683 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 ANKRD36BP1Q96IX9 119 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 AGO2Q9UKV8 859 aaKnown RBP13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 CCPG1Q9ULG6 757 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 PCDHB12Q9Y5F1 795 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 IRS2Q9Y4H2 1338 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 B4GAT1O43505 415 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 ERBB2P04626 1255 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 NCAM1P13591 858 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 DGKZQ13574 1117 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 PRPSAP1Q14558 356 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 Q3C1V9 767 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 DCLRE1AQ6PJP8 1040 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 ACDQ96AP0 544 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 BEGAINQ9BUH8 593 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 ADI1Q9BV57 179 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 CCDC167Q9P0B6 97 aa13.31□□□□□ -0.28
GAPVD1-220ENST00000497580 TMEM233B4DJY2 109 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 SULT1C4O75897 302 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 MT-ND1P03886 318 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 NAT1P18440 290 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 NEK2P51955 445 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 ARPC4P59998 168 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms