RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 NOMO1Q15155 1222 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 CCNG2Q16589 344 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 CYP1B1Q16678 543 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 SLC44A4Q53GD3 710 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 TIGD7Q6NT04 549 aaPredicted RBP20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 NPWQ8N729 165 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 NKD2Q969F2 451 aaPredicted RBP20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 HAUS1Q96CS2 278 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 CHFRQ96EP1 664 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 NELL2Q99435 816 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 NDFIP2Q9NV92 336 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 DNAJC17Q9NVM6 304 aaKnown RBP20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 PLK2Q9NYY3 685 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 AMACRQ9UHK6 382 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 GGA2Q9UJY4 613 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 HPCAL4Q9UM19 191 aa20.22■□□□□ 0.83
SCAMP3-209ENST00000497470 KDELR3O43731 214 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 DRD1P21728 446 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 GARSP41250 739 aaKnown RBP20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 DNA2P51530 1060 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 ADCY2Q08462 1091 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 LMAN2Q12907 356 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 WHAMMP3Q1A5X7 153 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 LONRF2Q1L5Z9 754 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 FBXO43Q4G163 708 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 INO80DQ53TQ3 878 aaPredicted RBP20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 FSCBQ5H9T9 825 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 TERB1Q8NA31 727 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 SLC35B2Q8TB61 432 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 HEMGNQ9BXL5 484 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 SLC39A8Q9C0K1 460 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 DRG1Q9Y295 367 aaKnown RBP20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 PIAS3Q9Y6X2 628 aa20.21■□□□□ 0.83
SCAMP3-209ENST00000497470 CFAP69A5D8W1 941 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 CCDC188H7C350 402 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 MFSD11O43934 449 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 APODP05090 189 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 ATP5BP06576 529 aaKnown RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 CLCN6P51797 869 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 STARD6P59095 220 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 GBE1Q04446 702 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 IL10RBQ08334 325 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 PPIDQ08752 370 aaKnown RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 SLC10A2Q12908 348 aaPredicted RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 SIX1Q15475 284 aaPredicted RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 HSF5Q4G112 596 aaPredicted RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 TMEM196Q5HYL7 178 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 CCDC181Q5TID7 509 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 RNF219Q5W0B1 726 aaPredicted RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 KAZNQ674X7 775 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 RETSATQ6NUM9 610 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 AADACL2Q6P093 401 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 CIR1Q86X95 450 aaPredicted RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 C12orf50Q8NA57 414 aaPredicted RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 WFDC5Q8TCV5 224 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 RUNDC3BQ96NL0 473 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 PSMB7Q99436 277 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 P2RY13Q9BPV8 354 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 FERMT1Q9BQL6 677 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 HERPUD2Q9BSE4 406 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 ABCB8Q9NUT2 735 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 FEZ2Q9UHY8 353 aaPredicted RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 CLEC4EQ9ULY5 219 aa20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 MRPS17Q9Y2R5 130 aaKnown RBP20.2■□□□□ 0.82
SCAMP3-209ENST00000497470 MYOFQ9NZM1 2061 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 KIAA1549LQ6ZVL6 1849 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 GOLGA6L10A0A0M3HER8 536 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 BCLAF3A2AJT9 711 aaKnown RBP20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 MCF2LO15068 1137 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 PRAMEF11O60813 436 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 ZMPSTE24O75844 475 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 SRPRAP08240 638 aaKnown RBP20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 STIP1P31948 543 aaKnown RBP20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 CSKP41240 450 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 CKAP4Q07065 602 aaKnown RBP20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 HNRNPDQ14103 355 aaKnown RBP20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 MLF2Q15773 248 aaPredicted RBP20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 PITRM1Q5JRX3 1037 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 ADIPOR2Q86V24 386 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 SYNPOQ8N3V7 929 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 OR52K2Q8NGK3 314 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 ACTL9Q8TC94 416 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 UCMAQ8WVF2 138 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 VAT1Q99536 393 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 OSBPL6Q9BZF3 934 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 MUC3BQ9H195 1237 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 HAUS2Q9NVX0 235 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 VPS28Q9UK41 221 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 INTS6Q9UL03 887 aaKnown RBP20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 HS3ST2Q9Y278 367 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 COL4A3Q01955 1670 aa20.19■□□□□ 0.82
SCAMP3-209ENST00000497470 NARSO43776 548 aaKnown RBP20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 MAFKO60675 156 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 KAT7O95251 611 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 POLR2EP19388 210 aaKnown RBP20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 CD70P32970 193 aa20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 PAPOLAP51003 745 aaKnown RBP20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 OTUD4Q01804 1114 aaKnown RBP20.18■□□□□ 0.82
SCAMP3-209ENST00000497470 LMNB2Q03252 620 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms