RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 HMBOX1Q6NT76 420 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 SLC30A9Q6PML9 568 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 RFX8Q6ZV50 586 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 SYT13Q7L8C5 426 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 ANKS1BQ7Z6G8 1248 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 TMEM199Q8N511 208 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 OR6Y1Q8NGX8 325 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 FAM110DQ8TAY7 271 aaPredicted RBP4.17□□□□□ -1.74
CD46-218ENST00000496723 CSGALNACT1Q8TDX6 532 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 CENPIQ92674 756 aaPredicted RBP4.17□□□□□ -1.74
CD46-218ENST00000496723 KCNJ9Q92806 393 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 ARRDC3Q96B67 414 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 PAGR1Q9BTK6 254 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 HDHD5Q9BXW7 423 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 ARHGAP39Q9C0H5 1083 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 FAM234AQ9H0X4 552 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 SLC25A13Q9UJS0 675 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 PKP3Q9Y446 797 aa4.17□□□□□ -1.74
CD46-218ENST00000496723 TCRBV7S3A2A0A539 114 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 EME2A4GXA9 379 aaPredicted RBP4.16□□□□□ -1.74
CD46-218ENST00000496723 FAM90A20PA6NIJ5 464 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 E7EVH7 732 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 HNRNPRO43390 633 aaKnown RBP4.16□□□□□ -1.74
CD46-218ENST00000496723 SMAD6O43541 496 aaKnown RBP4.16□□□□□ -1.74
CD46-218ENST00000496723 KRT38O76015 456 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 NEURL1O76050 574 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 TOMM40O96008 361 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 FGF2P09038 288 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 HOXB9P17482 250 aaPredicted RBP4.16□□□□□ -1.74
CD46-218ENST00000496723 CST5P28325 142 aaPredicted RBP4.16□□□□□ -1.74
CD46-218ENST00000496723 CHRNA5P30532 468 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 STAT1P42224 750 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 HTR6P50406 440 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 PRKAA2P54646 552 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 ZBTB16Q05516 673 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 ALKBH1Q13686 389 aaKnown RBP4.16□□□□□ -1.74
CD46-218ENST00000496723 PRKG1Q13976 671 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 DCTN1Q14203 1278 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 PRTGQ2VWP7 1150 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 FAM83BQ5T0W9 1011 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 NUGGCQ68CJ6 796 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 TRAPPC11Q7Z392 1133 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 VPS52Q8N1B4 723 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 TMEM174Q8WUU8 243 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 GOLGA1Q92805 767 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 ZNF419Q96HQ0 510 aaPredicted RBP4.16□□□□□ -1.74
CD46-218ENST00000496723 ARPC5LQ9BPX5 153 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 TRIM31Q9BZY9 425 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 HIPK2Q9H2X6 1198 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 ZNF304Q9HCX3 659 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 SAYSD1Q9NPB0 183 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 SPAG4Q9NPE6 437 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 FZD3Q9NPG1 666 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 RIPOR2Q9Y4F9 1068 aa4.16□□□□□ -1.74
CD46-218ENST00000496723 NPIPB13A6NJU9 1138 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 NPIPB5A8MRT5 1133 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 NPIPB4C9JG80 1138 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 LCKP06239 509 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 PKMP14618 531 aaKnown RBP4.15□□□□□ -1.75
CD46-218ENST00000496723 CHN1P15882 459 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 RBM5P52756 815 aaKnown RBP eCLIP4.15□□□□□ -1.754e-21■■■■□ 19.4
CD46-218ENST00000496723 OAZ1P54368 228 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 RHAGQ02094 409 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 CUL4BQ13620 913 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 PTGR1Q14914 329 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 POSTNQ15063 836 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 ALG10Q5BKT4 473 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 ALG10BQ5I7T1 473 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 ASPHD1Q5U4P2 390 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 MTFR2Q6P444 385 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 CCDC25Q86WR0 208 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 GALNT15Q8N3T1 639 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 TMEM217Q8N7C4 229 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 PTGR2Q8N8N7 351 aaPredicted RBP4.15□□□□□ -1.75
CD46-218ENST00000496723 FSIP1Q8NA03 581 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 TRAPPC12Q8WVT3 735 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 THOC3Q96J01 351 aaKnown RBP4.15□□□□□ -1.75
CD46-218ENST00000496723 CLPBQ9H078 707 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 PTPRHQ9HD43 1115 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 TMLHEQ9NVH6 421 aa4.15□□□□□ -1.75
CD46-218ENST00000496723 PRSS44E7EML9 344 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 LYL1P12980 280 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 MT3P25713 68 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 KLRC2P26717 231 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 GSTM2P28161 218 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 PPATQ06203 517 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 SMAD1Q15797 465 aaKnown RBP4.14□□□□□ -1.75
CD46-218ENST00000496723 ODF3L2Q3SX64 289 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 ENTPD8Q5MY95 495 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 DAB2IPQ5VWQ8 1189 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 RNF144BQ7Z419 303 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 KDELC2Q7Z4H8 507 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 GPSM1Q86YR5 675 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 ADHFE1Q8IWW8 467 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 CCT6BQ92526 530 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 FAM167BQ9BTA0 163 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.14□□□□□ -1.75
CD46-218ENST00000496723 FRMD8Q9BZ67 464 aaPredicted RBP4.14□□□□□ -1.75
CD46-218ENST00000496723 TASP1Q9H6P5 420 aa4.14□□□□□ -1.75
CD46-218ENST00000496723 PLEKHA2Q9HB19 425 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms