RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	CLDN5	O00501	218 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PHGDH	O43175	533 aa	Known RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	TIMM44	O43615	452 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	RECQL4	O94761	1208 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	MTTP	P55157	894 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	XIAP	P98170	497 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ARHGAP1	Q07960	439 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	HNRNPD	Q14103	355 aa	Known RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PQLC1	Q8N2U9	271 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PIP4K2C	Q8TBX8	421 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	TNIP3	Q96KP6	325 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	MARK4	Q96L34	752 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	CATSPER2	Q96P56	530 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	NXF3	Q9H4D5	531 aa	Known RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	RBPJL	Q9UBG7	517 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	FIS1	Q9Y3D6	152 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	TK2	O00142	265 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ZNF195	O14628	629 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	RTN3	O95197	1032 aa	Predicted RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PIGN	O95427	931 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ACAT1	P24752	427 aa	Known RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	NAGLU	P54802	743 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	CYLC2	Q14093	348 aa	Predicted RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	MAP7	Q14244	749 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	GRIK4	Q16099	956 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PDCD2	Q16342	344 aa	Predicted RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	SLC27A1	Q6PCB7	646 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	SATL1	Q86VE3	508 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	VPS39	Q96JC1	886 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	GORASP1	Q9BQQ3	440 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ACE2	Q9BYF1	805 aa	Predicted RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	UNK	Q9C0B0	810 aa	Known RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PLEKHA5	Q9HAU0	1116 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ZDHHC7	Q9NXF8	308 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	CLIC5	Q9NZA1	410 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	BCAP29	Q9UHQ4	241 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	AMH	P03971	560 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ERCC2	P18074	760 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	NDUFV1	P49821	464 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PGGT1B	P53609	377 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ARPIN	Q7Z6K5	226 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	GALNT4	Q8N4A0	578 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	TMA16	Q96EY4	203 aa	Known RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	GOLGA2P5	Q9HBQ8	144 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	CHRAC1	Q9NRG0	131 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	IGSF9	Q9P2J2	1179 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	UBQLN1	Q9UMX0	589 aa	Known RBP	13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	USP3	Q9Y6I4	520 aa		13.7	□□□□□ -0.22
SUPT20H-222	ENST00000495071	TMEM114	B3SHH9	223 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	CNMD	O75829	334 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ATP6V1B1	P15313	513 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ALOX15	P16050	662 aa	Predicted RBP	13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PML	P29590	882 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	CCR10	P46092	362 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	GRIA4	P48058	902 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	IREB2	P48200	963 aa	Known RBP	13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	RCN3	Q96D15	328 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	DCUN1D1	Q96GG9	259 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	SNX27	Q96L92	541 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	CNBD2	Q96M20	576 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	OSMR	Q99650	979 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PSMD13	Q9UNM6	376 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	MGAM	O43451	1857 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	RGSL1	A5PLK6	1076 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	HDAC3	O15379	428 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ZBTB24	O43167	697 aa	Predicted RBP	13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PTPN3	P26045	913 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PRDX6	P30041	224 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	NOS2	P35228	1153 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ADCYAP1R1	P41586	468 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	SYPL2	Q5VXT5	272 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	METTL21C	Q5VZV1	264 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	SPATA24	Q86W54	205 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	DSEL	Q8IZU8	1212 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ZNF560	Q96MR9	790 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	APBA2	Q99767	749 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	SETD4	Q9NVD3	440 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ADM5	C9JUS6	153 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	TRPA1	O75762	1119 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	AP2A1	O95782	977 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	RPL14	P50914	215 aa	Known RBP	13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	LSM12	Q3MHD2	195 aa	Known RBP	13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	KBTBD6	Q86V97	674 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	USP33	Q8TEY7	942 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	STK39	Q9UEW8	545 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	RUVBL2	Q9Y230	463 aa	Known RBP	13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	CDYL	Q9Y232	598 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	SSC5D	A1L4H1	1573 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071	ANK1	P16157	1881 aa		13.69	□□□□□ -0.22
SUPT20H-222	ENST00000495071		A0A1B0GVG6	124 aa		13.68	□□□□□ -0.22
SUPT20H-222	ENST00000495071		G3V2L1	256 aa		13.68	□□□□□ -0.22
SUPT20H-222	ENST00000495071	SCN1A	P35498	2009 aa		13.68	□□□□□ -0.22
SUPT20H-222	ENST00000495071	LAMB3	Q13751	1172 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms