RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 SARDHQ9UL12 918 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 OR51B4Q9Y5P0 310 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 ACTL7AQ9Y615 435 aa10.92□□□□□ -0.66
NELFE-213ENST00000494956 PCNX2A6NKB5 2137 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 CACNA1EQ15878 2313 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 EDDM13A0A1B0GTR0 161 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 A0A1B0GTW7 788 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 SPAARA0A1B0GVQ0 90 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 LRRC10BA6NIK2 292 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 E9PAM4 449 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 K7ERQ8 282 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 KCNK3O14649 394 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 BCAT2O15382 392 aaPredicted RBP10.91□□□□□ -0.66
NELFE-213ENST00000494956 RNASEH2AO75792 299 aaKnown RBP10.91□□□□□ -0.66
NELFE-213ENST00000494956 CD59P13987 128 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 GNSP15586 552 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 PMLP29590 882 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 SLC8A1P32418 973 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 HOXD12P35452 270 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 DPP6P42658 865 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 PLK1P53350 603 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 CDH4P55283 916 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 ZNF252P-AS1Q0IIN9 211 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 CCDC14Q49A88 953 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 TTC31Q49AM3 519 aaPredicted RBP10.91□□□□□ -0.66
NELFE-213ENST00000494956 C5orf22Q49AR2 442 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 ACCSLQ4AC99 568 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 BRMS1LQ5PSV4 323 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 NCEH1Q6PIU2 408 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 LINGO4Q6UY18 593 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 Q6ZVU0 165 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 SND1Q7KZF4 910 aaKnown RBP eCLIP10.91□□□□□ -0.66
NELFE-213ENST00000494956 ANKRD20A12PQ8NF67 263 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 OR7D4Q8NG98 312 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 FRS2Q8WU20 508 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 PGAP3Q96FM1 320 aaPredicted RBP10.91□□□□□ -0.66
NELFE-213ENST00000494956 ORAI3Q9BRQ5 295 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 MUC3BQ9H195 1237 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 TAS2R14Q9NYV8 317 aa10.91□□□□□ -0.66
NELFE-213ENST00000494956 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.91□□□□□ -0.66
NELFE-213ENST00000494956 TARSL2A2RTX5 802 aaKnown RBP10.9□□□□□ -0.66
NELFE-213ENST00000494956 DRGXA6NNA5 263 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 FAM72CH0Y354 149 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 WNT9AO14904 365 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 SMAD6O43541 496 aaKnown RBP10.9□□□□□ -0.66
NELFE-213ENST00000494956 OPHN1O60890 802 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 CLDN11O75508 207 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 GJB3O75712 270 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 IL1BP01584 269 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 IGHV4-34P06331 123 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 RHOCP08134 193 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 C7P10643 843 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 RRM1P23921 792 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 RDXP35241 583 aaKnown RBP10.9□□□□□ -0.66
NELFE-213ENST00000494956 RFC1P35251 1148 aaPredicted RBP10.9□□□□□ -0.66
NELFE-213ENST00000494956 DRD3P35462 400 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 GALCP54803 685 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 FOXC1Q12948 553 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 SEMA3BQ13214 749 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 SLC12A1Q13621 1099 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 ARID5BQ14865 1188 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 DLG2Q15700 870 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 CLEC16AQ2KHT3 1053 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 FAM72AQ5TYM5 149 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 TTC39BQ5VTQ0 682 aaPredicted RBP10.9□□□□□ -0.66
NELFE-213ENST00000494956 SMYD5Q6GMV2 418 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 FAM72DQ6L9T8 149 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 PIP4P1Q86T03 277 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 FAM72BQ86X60 149 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 ZNF677Q86XU0 584 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 HDDC3Q8N4P3 179 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 CCDC185Q8N715 623 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 KDM1BQ8NB78 822 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 MSANTD4Q8NCY6 345 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.66
NELFE-213ENST00000494956 AGPAT1Q99943 283 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 FUCA2Q9BTY2 467 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 FBRSQ9HAH7 460 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 NDFIP2Q9NV92 336 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 RRN3Q9NYV6 651 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 ZNF212Q9UDV6 495 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 SUSD2Q9UGT4 822 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 VPS51Q9UID3 782 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 SLC25A13Q9UJS0 675 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 TBC1D30Q9Y2I9 924 aa10.9□□□□□ -0.66
NELFE-213ENST00000494956 KNL1Q8NG31 2342 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 IGLV3-10A0A075B6K4 115 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 SYCE3A1L190 88 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 C2CD4BA6NLJ0 364 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 TMCO5BA8MYB1 307 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 ATP9BO43861 1147 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 SH3BP5O60239 455 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 RNASEH1O60930 286 aaKnown RBP10.89□□□□□ -0.67
NELFE-213ENST00000494956 RTN2O75298 545 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 ENDOD1O94919 500 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 F9P00740 461 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 CTSLP07711 333 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 SYPP08247 313 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 SRCP12931 536 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 CSRP1P21291 193 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms