RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 C1orf74Q96LT6 269 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 HAPLN3Q96S86 360 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 TRIM7Q9C029 511 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 TMEM245Q9H330 911 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ZFAND3Q9H8U3 227 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 CACNA2D2Q9NY47 1150 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 STIM2Q9P246 746 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ADAMTS1Q9UHI8 967 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 OR51B4Q9Y5P0 310 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 SNX10Q9Y5X0 201 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 OTOGLQ3ZCN5 2332 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 TYW5A2RUC4 315 aaKnown RBP9.03□□□□□ -0.96
ITGB1-217ENST00000494395 TMEM191CA6NGB0 347 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 DRGXA6NNA5 263 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 AXIN1O15169 862 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 TIMM44O43615 452 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 CNTN5O94779 1100 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 HOXB2P14652 356 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 GABRG2P18507 467 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 PRKCHP24723 683 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 CNR2P34972 360 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 ADRA1BP35368 520 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 WASP42768 502 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 PLK1P53350 603 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 EPHA4P54764 986 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 SCAPQ12770 1279 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 CDO1Q16878 200 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 PLEKHG6Q3KR16 790 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 ALFQ53S48 1182 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 PITRM1Q5JRX3 1037 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 RABGAP1LQ5R372 815 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 ACBD5Q5T8D3 534 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-217ENST00000494395 MBLAC2Q68D91 279 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 CYP4V2Q6ZWL3 525 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-217ENST00000494395 CHPFQ8IZ52 775 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 CARNMT1Q8N4J0 409 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 ARFGAP1Q8N6T3 406 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 KDF1Q8NAX2 398 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-217ENST00000494395 TSTD1Q8NFU3 115 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 OR8K1Q8NGG5 319 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 FNIP1Q8TF40 1166 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 FAM172AQ8WUF8 416 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 GAB3Q8WWW8 586 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 ATRIPQ8WXE1 791 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 NKD2Q969F2 451 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-217ENST00000494395 NTAN1Q96AB6 310 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 MRGPRX3Q96LB0 322 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 RPRD1AQ96P16 312 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-217ENST00000494395 CNPY3Q9BT09 278 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 MAGEB5Q9BZ81 275 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 CIPCQ9C0C6 399 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 OSBPL2Q9H1P3 480 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 ABHD10Q9NUJ1 306 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 VANGL2Q9ULK5 521 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 TBC1D30Q9Y2I9 924 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 PAXBP1Q9Y5B6 917 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 STON1Q9Y6Q2 735 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 CEP192Q8TEP8 1941 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 THADAQ6YHU6 1953 aa9.03□□□□□ -0.96
ITGB1-217ENST00000494395 GPR179Q6PRD1 2367 aa9.02□□□□□ -0.96
ITGB1-217ENST00000494395 ABCA7Q8IZY2 2146 aa9.02□□□□□ -0.96
ITGB1-217ENST00000494395 NUP205Q92621 2012 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 SSU72P8A0A1W2PR75 194 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 TCRBV21S2A2A0A5A6 115 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 E9PAM4 449 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 FAM72CH0Y354 149 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 H0Y626 953 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 CLDN11O75508 207 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 IL2RAP01589 272 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 LMNAP02545 664 aaKnown RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 DLDP09622 509 aaKnown RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 MYBL1P10243 752 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 TIMP2P16035 220 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 MZF1P28698 734 aaPredicted RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 CSKP41240 450 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 COPAP53621 1224 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 CDH4P55283 916 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 SEMA3BQ13214 749 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 SLC12A1Q13621 1099 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 CDH18Q13634 790 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 FAM72AQ5TYM5 149 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 ANO7Q6IWH7 933 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 FAM72DQ6L9T8 149 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 ALKBH5Q6P6C2 394 aaKnown RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 Q6ZVU0 165 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 TMC6Q7Z403 805 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 NLRP14Q86W24 1093 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 FAM72BQ86X60 149 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 APCDD1Q8J025 514 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 CCDC185Q8N715 623 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 CYB5D2Q8WUJ1 264 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 UCMAQ8WVF2 138 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 SCG3Q8WXD2 468 aaKnown RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF653Q96CK0 615 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 PSMB7Q99436 277 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 TPSD1Q9BZJ3 242 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 SIK2Q9H0K1 926 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 TSPAN10Q9H1Z9 355 aaPredicted RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 POLMQ9NP87 494 aaPredicted RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 PARVAQ9NVD7 372 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms