RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 WDCPQ9H6R7 721 aa13.79□□□□□ -0.2
CTDSP1-212ENST00000494067 PCOLCE2Q9UKZ9 415 aa13.79□□□□□ -0.2
CTDSP1-212ENST00000494067 VANGL2Q9ULK5 521 aa13.79□□□□□ -0.2
CTDSP1-212ENST00000494067 FNDC3AQ9Y2H6 1198 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-212ENST00000494067 FARP1Q9Y4F1 1045 aaPredicted RBP13.79□□□□□ -0.2
CTDSP1-212ENST00000494067 OR51B4Q9Y5P0 310 aa13.79□□□□□ -0.2
CTDSP1-212ENST00000494067 EPG5Q9HCE0 2579 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 A0A1W2PPC4 97 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 F8VZ95 297 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 RNF103O00237 685 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 PLK4O00444 970 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 PAGE1O75459 146 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 CNTN5O94779 1100 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 MMEP08473 750 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 FTH1P19P0C7X4 201 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 ZNF18P17022 549 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 GOT1P17174 413 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 CHRNB2P17787 502 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 FLT3P36888 993 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 GABRB2P47870 512 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 PSMD8P48556 350 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 CCT8P50990 548 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 PLK1P53350 603 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 GALCP54803 685 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 RNASE9P60153 205 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 RACK1P63244 317 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 KRT83P78385 493 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 AUHQ13825 339 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 KRT31Q15323 416 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 KIF19Q2TAC6 998 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 ALFQ53S48 1182 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 FAM46CQ5VWP2 391 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 LRRC31Q6UY01 552 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 BNIPLQ7Z465 357 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 GLRX5Q86SX6 157 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 STK40Q8N2I9 435 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 KDF1Q8NAX2 398 aaPredicted RBP13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 OR2T34Q8NGX1 318 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 OR14C36Q8NHC7 312 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 EPS8L1Q8TE68 723 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 FRS2Q8WU20 508 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 NT5C3BQ969T7 300 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 TBCBQ99426 244 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 SIK2Q9H0K1 926 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 VPS16Q9H269 839 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 AASDHPPTQ9NRN7 309 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.78□□□□□ -0.27e-8■□□□□ 10.4
CTDSP1-212ENST00000494067 NOCTQ9UK39 431 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 ZMIZ1Q9ULJ6 1067 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 SNX11Q9Y5W9 270 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 DOCK4Q8N1I0 1966 aa13.78□□□□□ -0.2
CTDSP1-212ENST00000494067 C1QTNF3-AMACRE9PGA6 284 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 KCNK3O14649 394 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 WNT9AO14904 365 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 CLDN11O75508 207 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 SULT1E1P49888 294 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 CDH4P55283 916 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 NOMO3P69849 1222 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 DEUP1Q05D60 604 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 CCDC15Q0P6D6 951 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 C5orf22Q49AR2 442 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 BRMS1LQ5PSV4 323 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 NCEH1Q6PIU2 408 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 RAB44Q7Z6P3 723 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 ERICH1Q86X53 443 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 ENOX1Q8TC92 643 aaKnown RBP13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 ADAMTS14Q8WXS8 1223 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 OR8D1Q8WZ84 308 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 GATA6Q92908 595 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 C18orf8Q96DM3 657 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 CCDC114Q96M63 670 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 SPAG5Q96R06 1193 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 PSMB7Q99436 277 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 HSD3B7Q9H2F3 369 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 ARHGEF38Q9NXL2 777 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 ADAMTS1Q9UHI8 967 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 VPS28Q9UK41 221 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 KLK13Q9UKR3 277 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 SARDHQ9UL12 918 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 CEP295Q9C0D2 2601 aa13.77□□□□□ -0.21
CTDSP1-212ENST00000494067 PCNX2A6NKB5 2137 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 DOCK9Q9BZ29 2069 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D3DA0A087WVF3 549 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D3IA0A087WXS9 549 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D3EA0A087X179 549 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D3KA0A087X1G2 549 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D3FA6NER0 549 aaPredicted RBP13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D3LB9A6J9 549 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 VILLO15195 856 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 CBFA2T3O75081 653 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 GJB6O95452 261 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D3HP0C7X1 549 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 EEF1GP26641 437 aaKnown RBP13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 DRD3P35462 400 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 SCNN1AP37088 669 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 GRK6P43250 576 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 CXCR3P49682 368 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 CCR5P51681 352 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 JAM2P57087 298 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D3GQ6DHY5 549 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms