RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 VANGL2Q9ULK5 521 aa11.74□□□□□ -0.53
RFC4-214ENST00000494047 AAR2Q9Y312 384 aaKnown RBP11.74□□□□□ -0.53
RFC4-214ENST00000494047 RPS6KL1Q9Y6S9 549 aa11.74□□□□□ -0.53
RFC4-214ENST00000494047 MCM3APO60318 1980 aa11.74□□□□□ -0.53
RFC4-214ENST00000494047 TRIP11Q15643 1979 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 CASQ2O14958 399 aaPredicted RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 TRIM13O60858 407 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 CABYRO75952 493 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 HSPA4LO95757 839 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 VTNP04004 478 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 FAM200BP0CF97 657 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 ZNF865P0CJ78 1059 aaPredicted RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 GNAT1P11488 350 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 COL6A1P12109 1028 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 DARSP14868 501 aaKnown RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 SP100P23497 879 aaPredicted RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 PAX7P23759 505 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 LHX1P48742 406 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 NUMBP49757 651 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 PSEN1P49768 467 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 SATB1Q01826 763 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 CDH17Q12864 832 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 PRKAA1Q13131 559 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 ORC1Q13415 861 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 MED21Q13503 144 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 DPYSQ14117 519 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 CA9Q16790 459 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 SOWAHAQ2M3V2 549 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 ANO4Q32M45 955 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 RARS2Q5T160 578 aaKnown RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 TAPT1Q6NXT6 567 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 TRMT10BQ6PF06 316 aaKnown RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 RNF180Q86T96 592 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 TTC7BQ86TV6 843 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 TAB3Q8N5C8 712 aaPredicted RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 C12orf29Q8N999 325 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 B3GALNT2Q8NCR0 500 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 OR6Y1Q8NGX8 325 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 RP9Q8TA86 221 aaKnown RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 GATA6Q92908 595 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 PIWIL1Q96J94 861 aaKnown RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 KATNAL1Q9BW62 490 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 KLHL4Q9C0H6 718 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 ILKAPQ9H0C8 392 aaPredicted RBP11.73□□□□□ -0.53
RFC4-214ENST00000494047 CDH19Q9H159 772 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 S100A14Q9HCY8 104 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 CASS4Q9NQ75 786 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 GPATCH2LQ9NWQ4 482 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 SNTG2Q9NY99 539 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 TLK1Q9UKI8 766 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 RAP2CQ9Y3L5 183 aa11.73□□□□□ -0.53
RFC4-214ENST00000494047 SMIM31A0A1B0GVY4 71 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 HMX2A2RU54 273 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 ARHGAP42A6NI28 874 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 TRPC5OSA6NMA1 111 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 PRR5-ARHGAP8B1AHC4 643 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 DCLK1O15075 740 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 MFSD11O43934 449 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 TADA2AO75478 443 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 ANXA9O76027 345 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 SNAI1O95863 264 aaPredicted RBP11.72□□□□□ -0.53
RFC4-214ENST00000494047 MMP3P08254 477 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 GOT1P17174 413 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 CPOXP36551 454 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 TPI1P60174 286 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 ARHGAP8P85298 464 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 MPP3Q13368 585 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 RFTN1Q14699 578 aaPredicted RBP11.72□□□□□ -0.53
RFC4-214ENST00000494047 ACBD5Q5T8D3 534 aaPredicted RBP11.72□□□□□ -0.53
RFC4-214ENST00000494047 PGM2L1Q6PCE3 622 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 CDR2LQ86X02 465 aaPredicted RBP11.72□□□□□ -0.53
RFC4-214ENST00000494047 TREML1Q86YW5 311 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 KLHDC8BQ8IXV7 354 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 ALDH16A1Q8IZ83 802 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 GALNT15Q8N3T1 639 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 CCNYQ8ND76 341 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 DIS3LQ8TF46 1054 aaKnown RBP11.72□□□□□ -0.53
RFC4-214ENST00000494047 ARNTL2Q8WYA1 636 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 TOP1MTQ969P6 601 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 FAM149B1Q96BN6 582 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 PANX3Q96QZ0 392 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 FAM167BQ9BTA0 163 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 MECRQ9BV79 373 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 ADAM33Q9BZ11 813 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 PRKD2Q9BZL6 878 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 UBE2OQ9C0C9 1292 aaKnown RBP11.72□□□□□ -0.53
RFC4-214ENST00000494047 ADAMTS10Q9H324 1103 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 EPB41L1Q9H4G0 881 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 SPC25Q9HBM1 224 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 SNX15Q9NRS6 342 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
RFC4-214ENST00000494047 PLK2Q9NYY3 685 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 DLGAP2Q9P1A6 1054 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 ARMCX1Q9P291 453 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 EPS15L1Q9UBC2 864 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 CDH22Q9UJ99 828 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 SCN1AP35498 2009 aa11.72□□□□□ -0.53
RFC4-214ENST00000494047 TSC2P49815 1807 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 CCDC195A0A1B0GUA6 201 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms