RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PRKAG2Q9UGJ0 569 aa7□□□□□ -1.29
VPS13B-205ENST00000493587 A0A1W2PRG6 482 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CAPN14A8MX76 684 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 RHOBTB3O94955 611 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CFBP00751 764 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CD4P01730 458 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ALAS1P13196 640 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TCN1P20061 433 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 MAPK12P53778 367 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 IL1RL1Q01638 556 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PEX6Q13608 980 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 MESDQ14696 234 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 GARNL3Q5VVW2 1013 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 SLC9A4Q6AI14 798 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 POTEAQ6S8J7 498 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 RNF207Q6ZRF8 634 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 HAUS6Q7Z4H7 955 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 NEK8Q86SG6 692 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 STK32CQ86UX6 486 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 GPBP1Q86WP2 473 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ZFPM1Q8IX07 1006 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 FBXW8Q8N3Y1 598 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 SLC35G2Q8TBE7 412 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ACDQ96AP0 544 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 MSANTD3Q96H12 275 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 VPS39Q96JC1 886 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 AK8Q96MA6 479 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 FAM111AQ96PZ2 611 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 DIABLOQ9NR28 239 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CYP26B1Q9NR63 512 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 IGSF5Q9NSI5 407 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 THG1LQ9NWX6 298 aaKnown RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 LGALS13Q9UHV8 139 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TESMINQ9Y4I5 508 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TRAV20A0A0B4J274 112 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PP2D1A8MPX8 630 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 BHMG1C9JSJ3 638 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 H0YJX3 145 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 M0R3G1 203 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ERVH48-1M5A8F1 160 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 E2F3O00716 465 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CHMP2AO43633 222 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 LPXNO60711 386 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TSC22D2O75157 780 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 FGFR1P11362 822 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF3P17036 446 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 GARTP22102 1010 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PRDX5P30044 214 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 NMT1P30419 496 aaKnown RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PTGIRP43119 386 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 GALCP54803 685 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 UBXN2AP68543 259 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 RAD51Q06609 339 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 FAPQ12884 760 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 RAB39AQ14964 217 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 FAM47AQ5JRC9 791 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF704Q6ZNC4 412 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 DYMQ7RTS9 669 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF571Q7Z3V5 609 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CRLF3Q8IUI8 442 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TP53I13Q8NBR0 393 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 GALNT11Q8NCW6 608 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 C7orf43Q8WVR3 580 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ZUFSPQ96AP4 578 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 SERPINI1Q99574 410 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 SEC22CQ9BRL7 303 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 WACQ9BTA9 647 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 EFHD1Q9BUP0 239 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TEX13BQ9BXU2 312 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 MIR1-1HGQ9H1L0 117 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 KCNN2Q9H2S1 579 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ITM2CQ9NQX7 267 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PLSCR3Q9NRY6 295 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF224Q9NZL3 707 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 POLLQ9UGP5 575 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 XPO7Q9UIA9 1087 aaKnown RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 DNMT3LQ9UJW3 386 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PLA2G4CQ9UP65 541 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 FAM205AQ6ZU69 1335 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 OR5K4A6NMS3 321 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PRPF4O43172 522 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PHGDHO43175 533 aaKnown RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TOMM70O94826 608 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 APOA1P02647 267 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 MT-ND3P03897 115 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CTNNA2P26232 953 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 L1CAMP32004 1257 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 GNL1P36915 607 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CASP3P42574 277 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CAPZA2P47755 286 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PTPN5P54829 565 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 RUNX1T1Q06455 604 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 GABPAQ06546 454 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 C19orf57Q0VDD7 668 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PDIA2Q13087 525 aaKnown RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PLD1Q13393 1074 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PMS2P3Q13401 168 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CDK10Q15131 360 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms