RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 KCNJ8Q15842 424 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 IGFN1Q86VF2 1251 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 LDHDQ86WU2 507 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 HPS1Q92902 700 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 WNK4Q96J92 1243 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 RNF157Q96PX1 679 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 GATA5Q9BWX5 397 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 ILKAPQ9H0C8 392 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 TUBA8Q9NY65 449 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-210ENST00000493582 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
HDAC4-210ENST00000493582 G3V2L1 256 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 ERVK-10P10266 1014 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 CYP2C9P11712 490 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 IREB2P48200 963 aaKnown RBP11.92□□□□□ -0.5
HDAC4-210ENST00000493582 SESN2P58004 480 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-210ENST00000493582 IRF9Q00978 393 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 CNTN2Q02246 1040 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 C15orf59Q2T9L4 293 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-210ENST00000493582 CCDC153Q494R4 210 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 PERM1Q5SV97 790 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 DHRS1Q96LJ7 313 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 ZNF341Q9BYN7 854 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 DRC3Q9H069 523 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 DHX35Q9H5Z1 703 aaKnown RBP11.92□□□□□ -0.5
HDAC4-210ENST00000493582 ATAD3AQ9NVI7 634 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 MTMR10Q9NXD2 777 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 ST14Q9Y5Y6 855 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 FAM149AA5PLN7 773 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 TRIM64CA6NLI5 447 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 KCNU1A8MYU2 1149 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 HDAC3O15379 428 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 HDCP19113 662 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 TFEBP19484 476 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 TFE3P19532 575 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-210ENST00000493582 MAP4P27816 1152 aaKnown RBP11.92□□□□□ -0.5
HDAC4-210ENST00000493582 POLR2BP30876 1174 aaKnown RBP11.92□□□□□ -0.5
HDAC4-210ENST00000493582 GRIA3P42263 894 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 PSME3P61289 254 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 GALNT2Q10471 571 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 NFATC3Q12968 1075 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 TFDP2Q14188 446 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 TREML2Q5T2D2 321 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 SEL1L3Q68CR1 1132 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 NEPROQ6NW34 567 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 SCYL2Q6P3W7 929 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 SNX29P2Q8IUI4 249 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 OFCC1Q8IZS5 231 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 CADM3Q8N126 398 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 CBR4Q8N4T8 237 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 PCYOX1LQ8NBM8 494 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 MCUQ8NE86 351 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 ADAMTS16Q8TE57 1224 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 TRUB1Q8WWH5 349 aaKnown RBP11.92□□□□□ -0.5
HDAC4-210ENST00000493582 DOK1Q99704 481 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 ZNF518BQ9C0D4 1074 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 MUC3BQ9H195 1237 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 CAB39LQ9H9S4 337 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 SIAEQ9HAT2 523 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 ZFYVE28Q9HCC9 887 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 ZBTB26Q9HCK0 441 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 SNX15Q9NRS6 342 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 DAPK2Q9UIK4 370 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 NOX1Q9Y5S8 564 aa11.92□□□□□ -0.5
HDAC4-210ENST00000493582 COL14A1Q05707 1796 aaKnown RBP11.92□□□□□ -0.5
HDAC4-210ENST00000493582 FAM155AB1AL88 458 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 JAK1P23458 1154 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 IL4RP24394 825 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 GTF2A2P52657 109 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 PGGT1BP53609 377 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 NIPAL4Q0D2K0 466 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 GK5Q6ZS86 529 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 KCTD8Q6ZWB6 473 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 RAVER1Q8IY67 606 aaKnown RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 ZNF420Q8TAQ5 688 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 CDKL2Q92772 493 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 MTG1Q9BT17 334 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 HERC2P3Q9BVR0 1158 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 NDEL1Q9GZM8 345 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 RIC8BQ9NVN3 520 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 TXNDC16Q9P2K2 825 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 GMPR2Q9P2T1 348 aaKnown RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 IPO11Q9UI26 975 aaKnown RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 CNOT6Q9ULM6 557 aaKnown RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 PCDHGA7Q9Y5G6 932 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 PRORSD1PA6NEY8 169 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 ZNF839A8K0R7 811 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 DLGAP1O14490 977 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 DYNC1LI2O43237 492 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 GRID2O43424 1007 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 TRIM13O60858 407 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 GRAP2O75791 330 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 MATN1P21941 496 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 PPP4R4Q6NUP7 873 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 CYP4V2Q6ZWL3 525 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 XYLT1Q86Y38 959 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 FBXL20Q96IG2 436 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 CCDC68Q9H2F9 335 aa11.91□□□□□ -0.5
HDAC4-210ENST00000493582 NXF1Q9UBU9 619 aaKnown RBP11.91□□□□□ -0.5
HDAC4-210ENST00000493582 ZDHHC2Q9UIJ5 367 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms