RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TBC1D23Q9NUY8 699 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 VPS4AQ9UN37 437 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 UTRNP46939 3433 aa3.69□□□□□ -1.82
PTCD3-218ENST00000493430 SOS1Q07889 1333 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-218ENST00000493430 ABCC12Q96J65 1359 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 C4orf47A7E2U8 309 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 GOLIM4O00461 696 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 SLC28A2O43868 658 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 UGDHO60701 494 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 MT-ND5P03915 603 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 SLC3A2P08195 630 aaKnown RBP3.68□□□□□ -1.82
PTCD3-218ENST00000493430 GYS1P13807 737 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 ST6GAL1P15907 406 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 IDUAP35475 653 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 ZXDBP98169 803 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 KCNJ12Q14500 433 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 ACOX1Q15067 660 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 C1orf141Q5JVX7 400 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 FAM102BQ5T8I3 360 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 DARS2Q6PI48 645 aaKnown RBP3.68□□□□□ -1.82
PTCD3-218ENST00000493430 C18orf65Q6ZTR6 163 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 RNF44Q7L0R7 432 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 ADGRF4Q8IZF3 695 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 TMEM199Q8N511 208 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 NGEFQ8N5V2 710 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 SNX22Q96L94 193 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 SENP7Q9BQF6 1050 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 SLC25A32Q9H2D1 315 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 MOV10Q9HCE1 1003 aaKnown RBP3.68□□□□□ -1.82
PTCD3-218ENST00000493430 ABHD10Q9NUJ1 306 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 ASNSD1Q9NWL6 643 aa3.68□□□□□ -1.82
PTCD3-218ENST00000493430 AGO2Q9UKV8 859 aaKnown RBP3.68□□□□□ -1.82
PTCD3-218ENST00000493430 USP42Q9H9J4 1324 aaKnown RBP3.68□□□□□ -1.82
PTCD3-218ENST00000493430 ATAD5Q96QE3 1844 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 HEG1Q9ULI3 1381 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 A6NNZ2 444 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 HRGP04196 525 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 NGFRP08138 427 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 RPL17P18621 184 aaKnown RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 HOXD12P35452 270 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 PBX1P40424 430 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 POLD2P49005 469 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 PPATQ06203 517 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 FHL3Q13643 280 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 PTGR1Q14914 329 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 INPP5JQ15735 1006 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 KIAA0753Q2KHM9 967 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 PLEKHO1Q53GL0 409 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 TBC1D9BQ66K14 1250 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 PPP4R4Q6NUP7 873 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 PDXDC1Q6P996 788 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 TRAPPC11Q7Z392 1133 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 SRGAP1Q7Z6B7 1085 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 DCP1BQ8IZD4 617 aaKnown RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 FAM156AQ8NDB6 213 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 ABHD5Q8WTS1 349 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 ASB5Q8WWX0 329 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 AKAP1Q92667 903 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 KAT2BQ92831 832 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 CELF1Q92879 486 aaKnown RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 MSI2Q96DH6 328 aaKnown RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 ZNF479Q96JC4 524 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 STRBPQ96SI9 672 aaKnown RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 NTPCRQ9BSD7 190 aaKnown RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 TTLL2Q9BWV7 592 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 GATA5Q9BWX5 397 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 FZD3Q9NPG1 666 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 IPO11Q9UI26 975 aaKnown RBP3.67□□□□□ -1.82
PTCD3-218ENST00000493430 ANAPC4Q9UJX5 808 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 PCDHB2Q9Y5E7 798 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 MYH8P13535 1937 aa3.67□□□□□ -1.82
PTCD3-218ENST00000493430 CEMIPQ8WUJ3 1361 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 A0A1W2PPC1 479 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 PRYO14603 147 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 TCERG1O14776 1098 aaKnown RBP3.66□□□□□ -1.82
PTCD3-218ENST00000493430 SPTLC2O15270 562 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 KCNJ4P48050 445 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 FAM193AP78312 1265 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 DLGAP5Q15398 846 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 Q6ZTC4 211 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 MEIS3Q99687 375 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 THSD1Q9NS62 852 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 SELENONQ9NZV5 590 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 ICKQ9UPZ9 632 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 USP16Q9Y5T5 823 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 MYH7P12883 1935 aa3.66□□□□□ -1.82
PTCD3-218ENST00000493430 KIR2DS5A0A0G2JLQ3 304 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 ERVV-2B6SEH9 535 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 KIR2DS3K7RE56 304 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 ATG13O75143 517 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 ZBED1O96006 694 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 ANXA2P07355 339 aaKnown RBP3.65□□□□□ -1.83
PTCD3-218ENST00000493430 HMGB1P09429 215 aaKnown RBP3.65□□□□□ -1.83
PTCD3-218ENST00000493430 MYL6BP14649 208 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 HOXB2P14652 356 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 MATN1P21941 496 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 MMP8P22894 467 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 GPTP24298 496 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 PEX2P28328 305 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 RFC4P35249 363 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms