RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ZNF212Q9UDV6 495 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 ZFP37Q9Y6Q3 630 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 MYO18AQ92614 2054 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 CHD5Q8TDI0 1954 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 TRDMT1O14717 391 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 MTSS1O43312 755 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 VAV1P15498 845 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 ECHS1P30084 290 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 OR1E1P30953 314 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 RPL22P35268 128 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 CDH4P55283 916 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 RPS24P62847 133 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 ZNF33AQ06730 810 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 ANKRD54Q6NXT1 300 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 GPR149Q86SP6 731 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 LRRC49Q8IUZ0 686 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 FAM217AQ8IXS0 508 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 ATPAF2Q8N5M1 289 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 ITFG1Q8TB96 612 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 USP13Q92995 863 aaPredicted RBP14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 P2RY11Q96G91 374 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 RUFY1Q96T51 708 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 SLC39A8Q9C0K1 460 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 PRDM6Q9NQX0 595 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 PAK5Q9P286 719 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 CCL26Q9Y258 94 aa14.43□□□□□ -0.1
PDZRN3-210ENST00000492909 A0A1B0GVM2 712 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 E2F8A0AVK6 867 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 TYW5A2RUC4 315 aaKnown RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 TCAF2A6NFQ2 919 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 C5orf60A6NFR6 353 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 NDC80O14777 642 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 TSPAN3O60637 253 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CLDN11O75508 207 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 GCATO75600 419 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 HOXB8P17481 243 aaPredicted RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CHKAP35790 457 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 NRLP54845 237 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 PLTPP55058 493 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CBX2Q14781 532 aaPredicted RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 IZUMO3Q5VZ72 239 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CHST9Q7L1S5 443 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 HJURPQ8NCD3 748 aaPredicted RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 ZSWIM3Q96MP5 696 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 ZIM3Q96PE6 472 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 TSGA13Q96PP4 275 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 APOL5Q9BWW9 433 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 NOL6Q9H6R4 1146 aaKnown RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 SEPT10Q9P0V9 454 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 ARHGAP42A6NI28 874 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 RNF103O00237 685 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 DNALI1O14645 258 aaPredicted RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 RAMP2O60895 175 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 PRAMEF12O95522 483 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 FSHRP23945 695 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CCNCP24863 283 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 PAPOLAP51003 745 aaKnown RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 SGSHP51688 502 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 ITGA8P53708 1063 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 YBEYP58557 167 aaPredicted RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CAV1Q03135 178 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 DLX2Q07687 328 aaPredicted RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 ADAM15Q13444 863 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 SYCE2Q6PIF2 218 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 ZDHHC24Q6UX98 284 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 C4orf22Q6V702 233 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 ARID3BQ8IVW6 561 aaPredicted RBP14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 BBS7Q8IWZ6 715 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CCDC13Q8IYE1 715 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CPXM2Q8N436 756 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CCDC110Q8TBZ0 833 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 FBXO25Q8TCJ0 367 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 DEPDC1BQ8WUY9 529 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 ART4Q93070 314 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 FMO2Q99518 471 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 NEUROG2Q9H2A3 272 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 ZDHHC18Q9NUE0 388 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 CLDND1Q9NY35 253 aa14.42□□□□□ -0.1
PDZRN3-210ENST00000492909 SPTBN5Q9NRC6 3674 aaKnown RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 A0A0A0MRY4 1105 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 RASA4BC9J798 803 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 KCNK1O00180 336 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 GFRA2O00451 464 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 RASA4O43374 803 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 FAM153BP0C7A2 387 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 TCF3P15923 654 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 ZNF177Q13360 481 aaPredicted RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 POLD3Q15054 466 aaPredicted RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 PARP15Q460N3 678 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 FAM153CQ494X1 144 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 TIGD7Q6NT04 549 aaPredicted RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 ARHGEF18Q6ZSZ5 1173 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 PCGF5Q86SE9 256 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 SRLQ86TD4 932 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 IQCKQ8N0W5 287 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 ZSCAN18Q8TBC5 510 aaPredicted RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 TMA16Q96EY4 203 aaKnown RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 SPATA13Q96N96 652 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms