RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 CBX4O00257 560 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 RFPL3O75679 317 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 C1SP09871 688 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 CDK4P11802 303 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 GNA15P30679 374 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 RXRGP48443 463 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 ARRB1P49407 418 aaPredicted RBP20.5■□□□□ 0.87
NELFE-212ENST00000492539 ACADVLP49748 655 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 DNAJC3Q13217 504 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 TAF5Q15542 800 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 DPCR1Q3MIW9 517 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 SLC45A4Q5BKX6 768 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 NAPEPLDQ6IQ20 393 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 CIR1Q86X95 450 aaPredicted RBP20.5■□□□□ 0.87
NELFE-212ENST00000492539 ALG14Q96F25 216 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 LRIG1Q96JA1 1093 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 KDM4CQ9H3R0 1056 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 UBE2TQ9NPD8 197 aaPredicted RBP20.5■□□□□ 0.87
NELFE-212ENST00000492539 ACP6Q9NPH0 428 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 ARHGAP20Q9P2F6 1191 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 DACH1Q9UI36 760 aa20.5■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3DA0A087WVF3 549 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3IA0A087WXS9 549 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3EA0A087X179 549 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3KA0A087X1G2 549 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3FA6NER0 549 aaPredicted RBP20.49■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3LB9A6J9 549 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 SLC7A4O43246 635 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 THAP12O43422 761 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 PLRG1O43660 514 aaKnown RBP20.49■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3HP0C7X1 549 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 NUMBP49757 651 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 METAP1P53582 386 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 STX17P56962 302 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 RABGAP1LQ5R372 815 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 SFMBT2Q5VUG0 894 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3GQ6DHY5 549 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3CQ6IPX1 549 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.49■□□□□ 0.87
NELFE-212ENST00000492539 ENOSF1Q7L5Y1 443 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 TBC1D3Q8IZP1 549 aaPredicted RBP20.49■□□□□ 0.87
NELFE-212ENST00000492539 OXR1Q8N573 874 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 EID2Q8N6I1 236 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 TSC1Q92574 1164 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 BBC3Q96PG8 261 aaPredicted RBP20.49■□□□□ 0.87
NELFE-212ENST00000492539 SLC2A13Q96QE2 648 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 ASNSD1Q9NWL6 643 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 TMEM63CQ9P1W3 806 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 SLC12A6Q9UHW9 1150 aa20.49■□□□□ 0.87
NELFE-212ENST00000492539 PLK4O00444 970 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 GLI1P08151 1106 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 SLC2A3P11169 496 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 HNF1BP35680 557 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 OXCT1P55809 520 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 BNIP3Q12983 259 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 FBXL22Q6P050 247 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 KANSL1Q7Z3B3 1105 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 SPATS2Q86XZ4 545 aaKnown RBP20.48■□□□□ 0.87
NELFE-212ENST00000492539 DEFB106AQ8N104 65 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 WDTC1Q8N5D0 677 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 MFSD2AQ8NA29 543 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 OR8D1Q8WZ84 308 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 NXPE2Q96DL1 559 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 FAM204AQ9H8W3 233 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 SARDHQ9UL12 918 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 BPTFQ12830 3046 aa20.48■□□□□ 0.87
NELFE-212ENST00000492539 BECN2A8MW95 431 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 ATP9BO43861 1147 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 RTN2O75298 545 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 CCR1P32246 355 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 NUDT1P36639 197 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 CLDN6P56747 220 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 CDK17Q00537 523 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 CENPCQ03188 943 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 CT47A1Q5JQC4 288 aaPredicted RBP20.47■□□□□ 0.87
NELFE-212ENST00000492539 DSG4Q86SJ6 1040 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 PRPF39Q86UA1 669 aaKnown RBP20.47■□□□□ 0.87
NELFE-212ENST00000492539 IQCHQ86VS3 1027 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 TRIM69Q86WT6 500 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 OR52K2Q8NGK3 314 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 CPXM1Q96SM3 734 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 SRRTQ9BXP5 876 aaKnown RBP20.47■□□□□ 0.87
NELFE-212ENST00000492539 DDIT4Q9NX09 232 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 SLC25A13Q9UJS0 675 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 DMTF1Q9Y222 760 aa20.47■□□□□ 0.87
NELFE-212ENST00000492539 ALOX15BO15296 676 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 FGFR1OPO95684 399 aaKnown RBP20.46■□□□□ 0.87
NELFE-212ENST00000492539 JUPP14923 745 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 ERCC5P28715 1186 aaPredicted RBP20.46■□□□□ 0.87
NELFE-212ENST00000492539 IRAK1P51617 712 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 EFHC1Q5JVL4 640 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 AGBL4Q5VU57 503 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 FAM46CQ5VWP2 391 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 FBXL19Q6PCT2 694 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 GJB7Q6PEY0 223 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 TRIM65Q6PJ69 517 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 CRELD1Q96HD1 420 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 FAM81BQ96LP2 452 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 RPRD1AQ96P16 312 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms