RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 OFCC1Q8IZS5 231 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 TTC30BQ8N4P2 665 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 TSPAN17Q96FV3 270 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 UNKQ9C0B0 810 aaKnown RBP11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 HPS4Q9NQG7 708 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 SNX15Q9NRS6 342 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 ZNRF3Q9ULT6 936 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 NENFQ9UMX5 172 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 LTN1O94822 1766 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 E5RJQ4 531 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 AREL1O15033 823 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 MYO1DO94832 1006 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 CSH1P0DML2 217 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 CSH2P0DML3 217 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 SHMT1P34896 483 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 KRT6CP48668 564 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 ST13P50502 369 aaKnown RBP11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 SOX10P56693 466 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 MAPRE1Q15691 268 aaKnown RBP11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 ZACNQ401N2 412 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 KCNT2Q6UVM3 1135 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 ZNF280CQ8ND82 737 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 URGCPQ8TCY9 931 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 MARCH7Q9H992 704 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 FANCEQ9HB96 536 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 XPNPEP1Q9NQW7 623 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 GGA3Q9NZ52 723 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 FBXO40Q9UH90 709 aa11.49□□□□□ -0.57
CRNKL1-204ENST00000490910 FAM189A1O60320 539 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 MRPL28Q13084 256 aaKnown RBP11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 TRAF3Q13114 568 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 SQLEQ14534 574 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 NOMO1Q15155 1222 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 TKFCQ3LXA3 575 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 LSM12Q3MHD2 195 aaKnown RBP11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 AGAP9Q5VTM2 703 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 BORAQ6PGQ7 559 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 GK5Q6ZS86 529 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 OR8H2Q8N162 312 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 PPHLN1Q8NEY8 458 aaKnown RBP11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 ADAM32Q8TC27 787 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 CERS2Q96G23 380 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 BORCS6Q96GS4 357 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 RNF157Q96PX1 679 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 WDR18Q9BV38 432 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 KCNK13Q9HB14 408 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 PTBP2Q9UKA9 531 aaKnown RBP11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 NALCNQ8IZF0 1738 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 TRIM24O15164 1050 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 VILLO15195 856 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 RGS5O15539 181 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 CCNKO75909 580 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 SPATA31D3P0C874 917 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 NR4A1P22736 598 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 EFNA5P52803 228 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 PRKCEQ02156 737 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 STILQ15468 1287 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 ARMC4Q5T2S8 1044 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 SPATA31D4Q6ZUB0 917 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 ZDHHC13Q8IUH4 622 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 MINDY2Q8NBR6 621 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 OR2T34Q8NGX1 318 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 OR2T3Q8NH03 318 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 HTR3CQ8WXA8 447 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 UNC93B1Q9H1C4 597 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 PIF1Q9H611 641 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 ZNF302Q9NR11 478 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 ADAM28Q9UKQ2 775 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 VANGL2Q9ULK5 521 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 FAM149AA5PLN7 773 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 NOTOA8MTQ0 251 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 FAM25AB3EWG3 89 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 FAM25CB3EWG5 89 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 FAM25GB3EWG6 89 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 POLR2EP19388 210 aaKnown RBP11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 CAPRIN1Q14444 709 aaKnown RBP11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 PGS1Q32NB8 556 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 LIPMQ5VYY2 423 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 CDHR3Q6ZTQ4 885 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 BNIPLQ7Z465 357 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 IFT43Q96FT9 208 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 NSMCE3Q96MG7 304 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 HEPHQ9BQS7 1158 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 RPAP3Q9H6T3 665 aaPredicted RBP11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 TDRD3Q9H7E2 651 aaKnown RBP11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 STMN3Q9NZ72 180 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 GPRC5DQ9NZD1 345 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 TMEM216Q9P0N5 145 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 EGFL7Q9UHF1 273 aa11.48□□□□□ -0.57
CRNKL1-204ENST00000490910 PAPSS1O43252 624 aaPredicted RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 RPS6KA4O75676 772 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TSPAN9O75954 239 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 SNHG28P0DPA3 235 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 RUNX1T1Q06455 604 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 FAM98BQ52LJ0 330 aaKnown RBP11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 PPM1JQ5JR12 505 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 IL31Q6EBC2 164 aa11.47□□□□□ -0.57
CRNKL1-204ENST00000490910 TMEM214Q6NUQ4 689 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms