RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TNK2Q07912 1038 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 XRCC4Q13426 336 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 TMCO4Q5TGY1 634 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 CCDC70Q6NSX1 233 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 RETSATQ6NUM9 610 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 ADAT2Q7Z6V5 191 aaKnown RBP11.22□□□□□ -0.61
VARS2-210ENST00000490699 METTL3Q86U44 580 aaKnown RBP11.22□□□□□ -0.61
VARS2-210ENST00000490699 NLRP14Q86W24 1093 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 UBALD2Q8IYN6 164 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 PLD5Q8N7P1 536 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 CEP112Q8N8E3 955 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 NAT16Q8N8M0 369 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 COG1Q8WTW3 980 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 TFB1MQ8WVM0 346 aaKnown RBP11.22□□□□□ -0.61
VARS2-210ENST00000490699 ASIC4Q96FT7 647 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 SHDQ96IW2 340 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 PNKPQ96T60 521 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 RPP25Q9BUL9 199 aaKnown RBP11.22□□□□□ -0.61
VARS2-210ENST00000490699 MAGEB5Q9BZ81 275 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 HPS4Q9NQG7 708 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 SLC2A4RGQ9NR83 387 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 ABCB8Q9NUT2 735 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 GTSE1Q9NYZ3 720 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 GGA2Q9UJY4 613 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 DUSP12Q9UNI6 340 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 MRPS17Q9Y2R5 130 aaKnown RBP11.22□□□□□ -0.61
VARS2-210ENST00000490699 PIAS3Q9Y6X2 628 aa11.22□□□□□ -0.61
VARS2-210ENST00000490699 DOCK4Q8N1I0 1966 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 CFAP69A5D8W1 941 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 RASA4BC9J798 803 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 CCDC188H7C350 402 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 GFRA2O00451 464 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 ZNF185O15231 689 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 RASA4O43374 803 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 TIMM44O43615 452 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 TULP3O75386 442 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 ASLP04424 464 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 CSKP41240 450 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 IRAK1P51617 712 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 ST8SIA6P61647 398 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 OTUD4Q01804 1114 aaKnown RBP11.21□□□□□ -0.61
VARS2-210ENST00000490699 ZNF33AQ06730 810 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 AP1B1Q10567 949 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 GRSF1Q12849 480 aaKnown RBP eCLIP11.21□□□□□ -0.61
VARS2-210ENST00000490699 EIF4HQ15056 248 aaKnown RBP11.21□□□□□ -0.61
VARS2-210ENST00000490699 HEATR6Q6AI08 1181 aaKnown RBP11.21□□□□□ -0.61
VARS2-210ENST00000490699 AADACL2Q6P093 401 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 DARS2Q6PI48 645 aaKnown RBP11.21□□□□□ -0.61
VARS2-210ENST00000490699 GSTA5Q7RTV2 222 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 PQLC3Q8N755 202 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 DCAF4L2Q8NA75 395 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 TTC8Q8TAM2 541 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 ACTL9Q8TC94 416 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 GRK7Q8WTQ7 553 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 ACDQ96AP0 544 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 CELF6Q96J87 481 aaKnown RBP11.21□□□□□ -0.61
VARS2-210ENST00000490699 MS4A14Q96JA4 679 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 CCDC114Q96M63 670 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 P2RY13Q9BPV8 354 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 CIPCQ9C0C6 399 aa11.21□□□□□ -0.61
VARS2-210ENST00000490699 TICRRQ7Z2Z1 1910 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 CTAGE15A4D2H0 777 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 TBC1D3BA6NDS4 549 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 SPECC1L-ADORA2AF8WAN1 911 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 CBX4O00257 560 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 GAS8O95995 478 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 CTAGE8P0CG41 777 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 RBP3P10745 1247 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 CHRNA3P32297 505 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 GARSP41250 739 aaKnown RBP11.2□□□□□ -0.62
VARS2-210ENST00000490699 GRIA2P42262 883 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 PAPOLAP51003 745 aaKnown RBP11.2□□□□□ -0.62
VARS2-210ENST00000490699 GBE1Q04446 702 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 KDSRQ06136 332 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 SLC20A2Q08357 652 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 GALNT2Q10471 571 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 LMAN2Q12907 356 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 KLF1Q13351 362 aaPredicted RBP11.2□□□□□ -0.62
VARS2-210ENST00000490699 BYSLQ13895 437 aaKnown RBP11.2□□□□□ -0.62
VARS2-210ENST00000490699 NOMO1Q15155 1222 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 CCNG2Q16589 344 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 PLEKHG6Q3KR16 790 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 TJAP1Q5JTD0 557 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 CXorf57Q6NSI4 855 aaKnown RBP11.2□□□□□ -0.62
VARS2-210ENST00000490699 CTAGE6Q86UF2 777 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 ZC3H18Q86VM9 953 aaKnown RBP11.2□□□□□ -0.62
VARS2-210ENST00000490699 CREG2Q8IUH2 290 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 CTAGE4Q8IX94 777 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 GJD3Q8N144 294 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 NPWQ8N729 165 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 PDCD7Q8N8D1 485 aaKnown RBP11.2□□□□□ -0.62
VARS2-210ENST00000490699 CCDC89Q8N998 374 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 CASKIN2Q8WXE0 1202 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 ARHGEF2Q92974 986 aaKnown RBP11.2□□□□□ -0.62
VARS2-210ENST00000490699 MAGOHBQ96A72 148 aaKnown RBP11.2□□□□□ -0.62
VARS2-210ENST00000490699 LRRC45Q96CN5 670 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 HDAC11Q96DB2 347 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 MYEOVQ96EZ4 313 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 HMCESQ96FZ2 354 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 FEM1AQ9BSK4 669 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms