RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 TBCBQ99426 244 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 GATA5Q9BWX5 397 aaPredicted RBP13.07□□□□□ -0.32
SHOX2-205ENST00000490689 XPR1Q9UBH6 696 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 NENFQ9UMX5 172 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 CFAP99D6REC4 459 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ACO1P21399 889 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ACAT1P24752 427 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 CRABP2P29373 138 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 CLK1P49759 484 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 CCNA1P78396 465 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 XRRA1Q6P2D8 792 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ANGPTL8Q6UXH0 198 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 FASTKD5Q7L8L6 764 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 SAPCD2Q86UD0 394 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 OFCC1Q8IZS5 231 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 PHC3Q8NDX5 983 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 RIN3Q8TB24 985 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 GATA6Q92908 595 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ZBTB18Q99592 522 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 CLK4Q9HAZ1 481 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 PRMT7Q9NVM4 692 aaPredicted RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 TRNAU1APQ9NX07 287 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 STK39Q9UEW8 545 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 TRIM38O00635 465 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 TSPAN3O60637 253 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 DLGAP3O95886 979 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 MPOP05164 745 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 TFEBP19484 476 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ATXN1P54253 815 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 TAF12Q16514 161 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 LSM12Q3MHD2 195 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 AGAP9Q5VTM2 703 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ZPBP2Q6X784 338 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ACMSDQ8TDX5 336 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 LPGAT1Q92604 370 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 EDEM1Q92611 657 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 MYO18AQ92614 2054 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ZNF541Q9H0D2 1346 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 VWA5AO00534 786 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ARPP19P56211 112 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 CA9Q16790 459 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 SGO1Q5FBB7 561 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 SAMD4BQ5PRF9 694 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 CERCAMQ5T4B2 595 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ANKRD23Q86SG2 305 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 DNAJB14Q8TBM8 379 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 IFT43Q96FT9 208 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 THUMPD3Q9BV44 507 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 FICDQ9BVA6 458 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 PNPLA3Q9NST1 481 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 SEPT3Q9UH03 358 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 PRPF19Q9UMS4 504 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 RAP2CQ9Y3L5 183 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 RIPK3Q9Y572 518 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 PTPRJQ12913 1337 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ERI2A8K979 691 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 AP3B1O00203 1094 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 AGRPO00253 132 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 MAGEB3O15480 346 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 TFPTP0C1Z6 253 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 CARTPTQ16568 116 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ZNF618Q5T7W0 954 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 SLC9A4Q6AI14 798 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 BNIPLQ7Z465 357 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 SHCBP1Q8NEM2 672 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 DACT3Q96B18 629 aaPredicted RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 MFSD3Q96ES6 412 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 TIMMDC1Q9NPL8 285 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 ARHGAP28Q9P2N2 729 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
SHOX2-205ENST00000490689 TEX264Q9Y6I9 313 aa13.06□□□□□ -0.32
SHOX2-205ENST00000490689 PLIN4Q96Q06 1357 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 H2AFYO75367 372 aaKnown RBP13.05□□□□□ -0.32
SHOX2-205ENST00000490689 LYPLA2O95372 231 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 KRT75O95678 551 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 PCNAP12004 261 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 HOXA10P31260 410 aaPredicted RBP13.05□□□□□ -0.32
SHOX2-205ENST00000490689 SLC18A2Q05940 514 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 ADIGQ0VDE8 80 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 DGCR6Q14129 220 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 DPY19L2P1Q6NXN4 242 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 CROCCP3Q8IVE0 287 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 ZCCHC7Q8N3Z6 543 aaKnown RBP13.05□□□□□ -0.32
SHOX2-205ENST00000490689 TNIP2Q8NFZ5 429 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 BLOC1S6Q9UL45 172 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 EFR3BQ9Y2G0 817 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
SHOX2-205ENST00000490689 A0A088AWK7 358 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 GOLGA8CPA6NN73 597 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 GCAP28676 217 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 SERPINB10P48595 397 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 ARHGDIAP52565 204 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 MTTPP55157 894 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 CDH13P55290 713 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 GTF2H3Q13889 308 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 SPANXN3Q5MJ09 141 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms