RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TAS2R38P59533 333 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 ECT2LQ008S8 904 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 FAM133BQ5BKY9 247 aaKnown RBP14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 OR6B2Q6IFH4 312 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 BORAQ6PGQ7 559 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 GCNT7Q6ZNI0 430 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 EDEM1Q92611 657 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 MIB2Q96AX9 1013 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 IFT43Q96FT9 208 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 PRICKLE1Q96MT3 831 aaPredicted RBP14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 CCDC3Q9BQI4 270 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 FOXP3Q9BZS1 431 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 ZNF71Q9NQZ8 489 aaPredicted RBP14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 NCKIPSDQ9NZQ3 722 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 CCDC39Q9UFE4 941 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 PISDQ9UG56 409 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 CEP83Q9Y592 693 aa14.14□□□□□ -0.15
EXOSC3-207ENST00000490516 PRAMEF33A0A0G2JMD5 474 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 A0A1W2PQU0 124 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 LRRIQ3A6PVS8 624 aaPredicted RBP14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 NVLO15381 856 aaKnown RBP14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 PRAMEF10O60809 474 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 RPS24P62847 133 aaKnown RBP14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 FZD2Q14332 565 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 ZNF787Q6DD87 383 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 Q6ZSR6 202 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 STXBP4Q6ZWJ1 553 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 BHLHA9Q7RTU4 235 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 APCDD1Q8J025 514 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 NT5C1AQ9BXI3 368 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 PREBQ9HCU5 417 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 TMPRSS4Q9NRS4 437 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 OLA1Q9NTK5 396 aaKnown RBP14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 KLF15Q9UIH9 416 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 SALL4Q9UJQ4 1053 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 TRPM6Q9BX84 2022 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 MED13Q9UHV7 2174 aa14.13□□□□□ -0.15
EXOSC3-207ENST00000490516 NTN3O00634 580 aaPredicted RBP14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 AQP9O43315 295 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 AGFG2O95081 481 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 ZBED1O96006 694 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 CSF2P04141 144 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 TRIM21P19474 475 aaKnown RBP14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 ITIH1P19827 911 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 AKT2P31751 481 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 TKTL1P51854 596 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 INCA1Q0VD86 236 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 EIF3IQ13347 325 aaKnown RBP14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 SGSM1Q2NKQ1 1148 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 ZNF284Q2VY69 593 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 RAB41Q5JT25 222 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 RNF219Q5W0B1 726 aaPredicted RBP14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 NADSYN1Q6IA69 706 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 PTAR1Q7Z6K3 402 aaPredicted RBP14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 ABI3BPQ7Z7G0 1075 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 PIGZQ86VD9 579 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 NELFCDQ8IXH7 590 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 CCDC65Q8IXS2 484 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 SLC35F3Q8IY50 421 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 ZNF557Q8N988 423 aaPredicted RBP14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 HJURPQ8NCD3 748 aaPredicted RBP14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 WDR48Q8TAF3 677 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 SPATA20Q8TB22 786 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 LMX1AQ8TE12 382 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 PPP1R13BQ96KQ4 1090 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 SPAG5Q96R06 1193 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 SLC12A9Q9BXP2 914 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 ULBP1Q9BZM6 244 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 FOXJ2Q9P0K8 574 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 CSNK1G3Q9Y6M4 447 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 ITPR3Q14573 2671 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 SDK2Q58EX2 2172 aa14.12□□□□□ -0.15
EXOSC3-207ENST00000490516 A1L4Q6 167 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 IRAK2O43187 625 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 MTSS1O43312 755 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 JMJD7P0C870 316 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 NME1P15531 152 aaKnown RBP14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 CD58P19256 250 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 HNRNPA2B1P22626 353 aaKnown RBP14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 CDH18Q13634 790 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 PM20D1Q6GTS8 502 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 EPM2AIP1Q7L775 607 aaPredicted RBP14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 DTX1Q86Y01 620 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 CFAP52Q8N1V2 620 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 ZNF507Q8TCN5 953 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 RNF139Q8WU17 664 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 ZSCAN31Q96LW9 406 aaPredicted RBP14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 IL12RB2Q99665 862 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 BOCQ9BWV1 1114 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 PANK2Q9BZ23 570 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 TUBD1Q9UJT1 453 aa14.11□□□□□ -0.15
EXOSC3-207ENST00000490516 UNC13CQ8NB66 2214 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 A6NNZ2 444 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 EIF3DO15371 548 aaKnown RBP eCLIP14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 ACSL4O60488 711 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 MOCS3O95396 460 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 ASS1P00966 412 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms