RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TRIM64A6NGJ6 449 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 TRIM64BA6NI03 449 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 KDM4EB2RXH2 506 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 NDC80O14777 642 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 TLR2O60603 784 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 TBCAO75347 108 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 BBOX1O75936 387 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CHRM4P08173 479 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 GZMKP49863 264 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 PMS2P54278 862 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 UBASH3AP57075 661 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SF3A3Q12874 501 aaKnown RBP eCLIP3.14□□□□□ -1.911e-9■■■■■ 34.6
UBXN4-208ENST00000490163 SLMAPQ14BN4 828 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CDO1Q16878 200 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 GLRA4Q5JXX5 417 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CDC73Q6P1J9 531 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 G2E3Q7L622 706 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 GALNT7Q86SF2 657 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 KIAA2013Q8IYS2 634 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 POGLUT1Q8NBL1 392 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 KCTD6Q8NC69 237 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SHKBP1Q8TBC3 707 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 GRAPLQ8TC17 118 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CABS1Q96KC9 395 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 PIGSQ96S52 555 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SPXQ9BT56 116 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CXorf56Q9H5V9 222 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ADD3Q9UEY8 706 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CNOT7Q9UIV1 285 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SHOC2Q9UQ13 582 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CEP83Q9Y592 693 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 XIRP1Q702N8 1843 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 DIP2AQ14689 1571 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 NEXMIFQ5QGS0 1516 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 SSU72P8A0A1W2PR75 194 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 FYB1O15117 783 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 PRPSAP2O60256 369 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 THEGLP0DJG4 465 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 DGKQP52824 942 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 ARFIP1P53367 373 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 ADPRHP54922 357 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 OLR1P78380 273 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 SPOCK1Q08629 439 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 IQCB1Q15051 598 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 GPR68Q15743 365 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 KRT80Q6KB66 452 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 SPRED2Q7Z698 418 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 FAM129CQ86XR2 697 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 TMEM116Q8NCL8 245 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 C11orf65Q8NCR3 313 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 SPATA18Q8TC71 538 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 CPT1CQ8TCG5 803 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 SCFD2Q8WU76 684 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 NCSTNQ92542 709 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 TRIM44Q96DX7 344 aaPredicted RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 PIWIL1Q96J94 861 aaKnown RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 JAKMIP1Q96N16 626 aaKnown RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 CRAMP1Q96RY5 1269 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 GORASP1Q9BQQ3 440 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 NAA11Q9BSU3 229 aaPredicted RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 MXD3Q9BW11 206 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 CHODLQ9H9P2 273 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 DNAJB9Q9UBS3 223 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 FBXO40Q9UH90 709 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 A2MP01023 1474 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 ARHGEF28Q8N1W1 1705 aaKnown RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 TMEM221A6NGB7 291 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 EXOC3O60645 756 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 TGDSO95455 350 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 PTMAP06454 111 aaKnown RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 INHBBP09529 407 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 ARCN1P48444 511 aaKnown RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 EIF3BP55884 814 aaKnown RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 AFMIDQ63HM1 303 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 TPGS2Q68CL5 300 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 NAPEPLDQ6IQ20 393 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 GLDNQ6ZMI3 551 aaPredicted RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 IGDCC3Q8IVU1 814 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 HDDC3Q8N4P3 179 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 FITM2Q8N6M3 262 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 NAT16Q8N8M0 369 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 TRIM63Q969Q1 353 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 JAKMIP2Q96AA8 810 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 CHAMP1Q96JM3 812 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 CD180Q99467 661 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 C11orf84Q9BUA3 381 aaPredicted RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 REXO4Q9GZR2 422 aaKnown RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 MTMR4Q9NYA4 1195 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 SH3BP4Q9P0V3 963 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 NDRG4Q9ULP0 352 aaKnown RBP3.13□□□□□ -1.91
UBXN4-208ENST00000490163 KCNE2Q9Y6J6 123 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 TAF6LQ9Y6J9 622 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 NOS1P29475 1434 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 MYOM2P54296 1465 aa3.13□□□□□ -1.91
UBXN4-208ENST00000490163 MTUS2Q5JR59 1369 aa3.12□□□□□ -1.91
UBXN4-208ENST00000490163 LNP1A1A4G5 178 aa3.12□□□□□ -1.91
UBXN4-208ENST00000490163 A4D1N5 150 aa3.12□□□□□ -1.91
UBXN4-208ENST00000490163 ANXA2P2A6NMY6 339 aa3.12□□□□□ -1.91
UBXN4-208ENST00000490163 SART1O43290 800 aaKnown RBP3.12□□□□□ -1.91
UBXN4-208ENST00000490163 SUN1O94901 812 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms