RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 LIMA1Q9UHB6 759 aaKnown RBP10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 PPM1HQ9ULR3 514 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 HS3ST2Q9Y278 367 aa10.01□□□□□ -0.81
TMEM39A-210ENST00000490099 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 SPAARA0A1B0GVQ0 90 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 A0A1B0GVT2 93 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 VILLO15195 856 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 EPHB6O15197 1021 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 MID1O15344 667 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 LATO43561 262 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 SH3BP5O60239 455 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 DKK1O94907 266 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 TOP3BO95985 862 aaKnown RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 CAPNS1P04632 268 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 PROS1P07225 676 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 MMEP08473 750 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 GOT1P17174 413 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 DRD3P35462 400 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 SOX5P35711 763 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 FLT3P36888 993 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 CSNK1EP49674 416 aaKnown RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 STK19P49842 368 aaPredicted RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 CCR5P51681 352 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 CDH4P55283 916 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 RACK1P63244 317 aaKnown RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 FMO1Q01740 532 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 CDR2Q01850 454 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 CENPCQ03188 943 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 SFSWAPQ12872 951 aaKnown RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 PTP4A2Q12974 167 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 NME3Q13232 169 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 ZNF177Q13360 481 aaPredicted RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 RAPGEF1Q13905 1077 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 KIF19Q2TAC6 998 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 HLA-BQ31612 363 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 ALFQ53S48 1182 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 CACUL1Q86Y37 369 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 MMAAQ8IVH4 418 aaKnown RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 STK40Q8N2I9 435 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 OR2T34Q8NGX1 318 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 BAHD1Q8TBE0 780 aaPredicted RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 CENPIQ92674 756 aaPredicted RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 GATA6Q92908 595 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 RPL10LQ96L21 214 aaKnown RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 RPRD1AQ96P16 312 aaPredicted RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 SPAG5Q96R06 1193 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 HAPLN3Q96S86 360 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 TBCBQ99426 244 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 PSMB7Q99436 277 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 TKTL2Q9H0I9 626 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 MIR1-1HGQ9H1L0 117 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 VPS16Q9H269 839 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 WDCPQ9H6R7 721 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 SYNCQ9H7C4 482 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 EBF2Q9HAK2 575 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 IL21RQ9HBE5 538 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 VANGL2Q9ULK5 521 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 TPX2Q9ULW0 747 aaKnown RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 STAP1Q9ULZ2 295 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 NCKAP1Q9Y2A7 1128 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 FNDC3AQ9Y2H6 1198 aaKnown RBP10□□□□□ -0.81
TMEM39A-210ENST00000490099 KNTC1P50748 2209 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 IGF2RP11717 2491 aa10□□□□□ -0.81
TMEM39A-210ENST00000490099 CXorf51AA0A1B0GTR3 108 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 A0A1W2PPC4 97 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 LGALS16A8MUM7 142 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 MCF2LO15068 1137 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 SLC7A4O43246 635 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 PCDHGA12O60330 932 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 RNASEH1O60930 286 aaKnown RBP9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 CNTN5O94779 1100 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 TRIM16O95361 564 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 ADH1BP00325 375 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 UNGP13051 313 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 VAV1P15498 845 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 NNMTP40261 264 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 CTSKP43235 329 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 KLK7P49862 253 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 COPB1P53618 953 aaKnown RBP9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 GSCP56915 257 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 SIM1P81133 766 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 NRG1Q02297 640 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 ZNF423Q2M1K9 1284 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 KCNT1Q5JUK3 1230 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 TAF3Q5VWG9 929 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 NAA35Q5VZE5 725 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 NCEH1Q6PIU2 408 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 TRIM72Q6ZMU5 477 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 RAB44Q7Z6P3 723 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 SETD3Q86TU7 594 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 SH2D3CQ8N5H7 860 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 SLC20A1Q8WUM9 679 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 CPA5Q8WXQ8 436 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 RNF34Q969K3 372 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 CAMK1GQ96NX5 476 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 ERGIC2Q96RQ1 377 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 PCDHB18PQ96TA0 734 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 KDM4CQ9H3R0 1056 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms