RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 STK19P49842 368 aaPredicted RBP20.03■□□□□ 0.8
APTX-229ENST00000489583 SETMARQ53H47 684 aaPredicted RBP20.03■□□□□ 0.8
APTX-229ENST00000489583 TTI2Q6NXR4 508 aa20.03■□□□□ 0.8
APTX-229ENST00000489583 TMEM110Q86TL2 294 aa20.03■□□□□ 0.8
APTX-229ENST00000489583 IQCHQ86VS3 1027 aa20.03■□□□□ 0.8
APTX-229ENST00000489583 MYEOVQ96EZ4 313 aa20.03■□□□□ 0.8
APTX-229ENST00000489583 DYRK4Q9NR20 520 aa20.03■□□□□ 0.8
APTX-229ENST00000489583 XPO7Q9UIA9 1087 aaKnown RBP20.03■□□□□ 0.8
APTX-229ENST00000489583 VPS28Q9UK41 221 aa20.03■□□□□ 0.8
APTX-229ENST00000489583 PLXNB3Q9ULL4 1909 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 BNIP3LO60238 219 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 HSF2BPO75031 334 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 MAT2AP31153 395 aaKnown RBP20.02■□□□□ 0.8
APTX-229ENST00000489583 NXPH1P58417 271 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 KRT83P78385 493 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 ILKQ13418 452 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 KCNJ12Q14500 433 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 TRIM59Q8IWR1 403 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 BAP1Q92560 729 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 KREMEN1Q96MU8 473 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 SRRTQ9BXP5 876 aaKnown RBP20.02■□□□□ 0.8
APTX-229ENST00000489583 MUC3BQ9H195 1237 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 CNTN6Q9UQ52 1028 aa20.02■□□□□ 0.8
APTX-229ENST00000489583 TMEM131Q92545 1883 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 CABIN1Q9Y6J0 2220 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 A0A087WV48 116 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 ALOX15BO15296 676 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 WNT1P04628 370 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 CD44P16070 742 aaKnown RBP20.01■□□□□ 0.79
APTX-229ENST00000489583 STX17P56962 302 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 SEMG2Q02383 582 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 DNAJC3Q13217 504 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 NME3Q13232 169 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 PDCLQ13371 301 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 CAMK2BQ13554 666 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 SOWAHCQ53LP3 525 aaPredicted RBP20.01■□□□□ 0.79
APTX-229ENST00000489583 CIR1Q86X95 450 aaPredicted RBP20.01■□□□□ 0.79
APTX-229ENST00000489583 PPP1R13BQ96KQ4 1090 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 GBP4Q96PP9 640 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 EBF2Q9HAK2 575 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 PAXBP1Q9Y5B6 917 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 ACACAQ13085 2346 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 KNL1Q8NG31 2342 aa20.01■□□□□ 0.79
APTX-229ENST00000489583 A0A1W2PR77 199 aa20■□□□□ 0.79
APTX-229ENST00000489583 PRAMEF26H0Y7S4 382 aa20■□□□□ 0.79
APTX-229ENST00000489583 BIN1O00499 593 aa20■□□□□ 0.79
APTX-229ENST00000489583 LATO43561 262 aa20■□□□□ 0.79
APTX-229ENST00000489583 RTN2O75298 545 aa20■□□□□ 0.79
APTX-229ENST00000489583 CLDN11O75508 207 aa20■□□□□ 0.79
APTX-229ENST00000489583 CKMT2P17540 419 aa20■□□□□ 0.79
APTX-229ENST00000489583 KRT9P35527 623 aa20■□□□□ 0.79
APTX-229ENST00000489583 RXRGP48443 463 aa20■□□□□ 0.79
APTX-229ENST00000489583 NUMBP49757 651 aa20■□□□□ 0.79
APTX-229ENST00000489583 PLK1P53350 603 aa20■□□□□ 0.79
APTX-229ENST00000489583 PTK2Q05397 1052 aa20■□□□□ 0.79
APTX-229ENST00000489583 ARHGAP44Q17R89 818 aa20■□□□□ 0.79
APTX-229ENST00000489583 HES3Q5TGS1 186 aa20■□□□□ 0.79
APTX-229ENST00000489583 OR6B2Q6IFH4 312 aa20■□□□□ 0.79
APTX-229ENST00000489583 ASNSD1Q9NWL6 643 aa20■□□□□ 0.79
APTX-229ENST00000489583 CYTH4Q9UIA0 394 aa20■□□□□ 0.79
APTX-229ENST00000489583 PPP1R3GB7ZBB8 358 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 PLRG1O43660 514 aaKnown RBP19.99■□□□□ 0.79
APTX-229ENST00000489583 RNGTTO60942 597 aaKnown RBP19.99■□□□□ 0.79
APTX-229ENST00000489583 RECQLP46063 649 aaPredicted RBP19.99■□□□□ 0.79
APTX-229ENST00000489583 ACADVLP49748 655 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 MARSP56192 900 aaKnown RBP19.99■□□□□ 0.79
APTX-229ENST00000489583 PPP2CBP62714 309 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 PPP2CAP67775 309 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 DAB2P98082 770 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 TARDBPQ13148 414 aaKnown RBP eCLIP19.99■□□□□ 0.79
APTX-229ENST00000489583 DLG2Q15700 870 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 FBXL22Q6P050 247 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 GBP6Q6ZN66 633 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 C11orf57Q6ZUT1 292 aaPredicted RBP19.99■□□□□ 0.79
APTX-229ENST00000489583 TRIM69Q86WT6 500 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 DEFB106AQ8N104 65 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 PIP4K2CQ8TBX8 421 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 KLHDC7BQ96G42 594 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 FEM1AQ9BSK4 669 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 C2orf49Q9BVC5 232 aaPredicted RBP19.99■□□□□ 0.79
APTX-229ENST00000489583 NRSN2Q9GZP1 204 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 PDCL3Q9H2J4 239 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 PREBQ9HCU5 417 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 EVA1BQ9NVM1 165 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 VANGL2Q9ULK5 521 aa19.99■□□□□ 0.79
APTX-229ENST00000489583 LAMA5O15230 3695 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 CBX4O00257 560 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 MCF2LO15068 1137 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 IGLV3-25P01717 112 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 VAV1P15498 845 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 DRD3P35462 400 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 VASPP50552 380 aaPredicted RBP19.98■□□□□ 0.79
APTX-229ENST00000489583 E2F1Q01094 437 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 BNIP3Q12983 259 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 AUHQ13825 339 aaKnown RBP19.98■□□□□ 0.79
APTX-229ENST00000489583 POM121L1PQ3SYA9 428 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 LRRC31Q6UY01 552 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 ATP11CQ8NB49 1132 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 CRACR2AQ9BSW2 395 aa19.98■□□□□ 0.79
APTX-229ENST00000489583 SIK2Q9H0K1 926 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms