RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 PTPRN2Q92932 1015 aa15.57■□□□□ 0.08
UFD1-209ENST00000489406 GLMNQ92990 594 aa15.57■□□□□ 0.08
UFD1-209ENST00000489406 ELMO3Q96BJ8 720 aa15.57■□□□□ 0.08
UFD1-209ENST00000489406 CALML4Q96GE6 196 aa15.57■□□□□ 0.08
UFD1-209ENST00000489406 LMLNQ96KR4 655 aa15.57■□□□□ 0.08
UFD1-209ENST00000489406 GFM1Q96RP9 751 aaKnown RBP15.57■□□□□ 0.08
UFD1-209ENST00000489406 SDCBP2Q9H190 292 aa15.57■□□□□ 0.08
UFD1-209ENST00000489406 XYLT2Q9H1B5 865 aa15.57■□□□□ 0.08
UFD1-209ENST00000489406 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.57■□□□□ 0.08
UFD1-209ENST00000489406 DONSONQ9NYP3 566 aa15.57■□□□□ 0.08
UFD1-209ENST00000489406 A0A1B0GTL3 188 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 D6RAR5 112 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 H3BM21 787 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 NME1P15531 152 aaKnown RBP15.56■□□□□ 0.08
UFD1-209ENST00000489406 NR1D1P20393 614 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 SLC6A4P31645 630 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 AKT2P31751 481 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 CASP5P51878 434 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 ZNF445P59923 1031 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 CNTN1Q12860 1018 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 FZD2Q14332 565 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 ANKRD1Q15327 319 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 AGBL4Q5VU57 503 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 SV2AQ7L0J3 742 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 KDM1BQ8NB78 822 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 POM121Q96HA1 1249 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 CATSPER2Q96P56 530 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 BOCQ9BWV1 1114 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 STIM2Q9P246 746 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 DKK3Q9UBP4 350 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 HMGXB4Q9UGU5 601 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 KLF15Q9UIH9 416 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 PADI4Q9UM07 663 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 TP53TG5Q9Y2B4 290 aa15.56■□□□□ 0.08
UFD1-209ENST00000489406 APCP25054 2843 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 ITIH6Q6UXX5 1313 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 A0A1W2PQU0 124 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 TPP1O14773 563 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 KIF20AO95235 890 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 STAU1O95793 577 aaKnown RBP15.55■□□□□ 0.08
UFD1-209ENST00000489406 LIFP15018 202 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 VAV1P15498 845 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 CD82P27701 267 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 CCKBRP32239 447 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 NOS2P35228 1153 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 CCL7P80098 99 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 ELAVL3Q14576 367 aaKnown RBP15.55■□□□□ 0.08
UFD1-209ENST00000489406 ADGRF1Q5T601 910 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 NUGGCQ68CJ6 796 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 RFWD3Q6PCD5 774 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 PTAR1Q7Z6K3 402 aaPredicted RBP15.55■□□□□ 0.08
UFD1-209ENST00000489406 MFN1Q8IWA4 741 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 FBXO18Q8NFZ0 1043 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 NKD1Q969G9 470 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 RPL10LQ96L21 214 aaKnown RBP15.55■□□□□ 0.08
UFD1-209ENST00000489406 TMEM74Q96NL1 305 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 STOML2Q9UJZ1 356 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 SARDHQ9UL12 918 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 CEP83Q9Y592 693 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 ESPL1Q14674 2120 aa15.55■□□□□ 0.08
UFD1-209ENST00000489406 SDK2Q58EX2 2172 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 SRPRAP08240 638 aaKnown RBP15.54■□□□□ 0.08
UFD1-209ENST00000489406 HNRNPA2B1P22626 353 aaKnown RBP15.54■□□□□ 0.08
UFD1-209ENST00000489406 ATICP31939 592 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 ATP1A2P50993 1020 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 BMT2Q1RMZ1 405 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 MMS22LQ6ZRQ5 1243 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 ABI3BPQ7Z7G0 1075 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 CRYBG2Q8N1P7 616 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 SDR16C5Q8N3Y7 309 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 SYAP1Q96A49 352 aaPredicted RBP15.54■□□□□ 0.08
UFD1-209ENST00000489406 SLC4A5Q9BY07 1137 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 PNPLA8Q9NP80 782 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 RABGEF1Q9UJ41 708 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 PCDHB13Q9Y5F0 798 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 USP3Q9Y6I4 520 aa15.54■□□□□ 0.08
UFD1-209ENST00000489406 NYNRINQ9P2P1 1898 aaKnown RBP15.53■□□□□ 0.08
UFD1-209ENST00000489406 NAV3Q8IVL0 2385 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 GOLGA6L7A0A1B0GV03 622 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 A0A1W2PQM1 296 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 A6NNZ2 444 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.53■□□□□ 0.08
UFD1-209ENST00000489406 NKX2-8O15522 239 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 RPLP0P05388 317 aaKnown RBP15.53■□□□□ 0.08
UFD1-209ENST00000489406 SLFN14P0C7P3 912 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 PRF1P14222 555 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 JUNDP17535 347 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 UBA7P41226 1012 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 NDST1P52848 882 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 TAS2R38P59533 333 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 C1orf61Q13536 156 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 ZNF284Q2VY69 593 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 PITRM1Q5JRX3 1037 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 RNF219Q5W0B1 726 aaPredicted RBP15.53■□□□□ 0.08
UFD1-209ENST00000489406 TMPRSS9Q7Z410 1059 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 PARGQ86W56 976 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 DCP2Q8IU60 420 aaKnown RBP15.53■□□□□ 0.08
UFD1-209ENST00000489406 IL22RA1Q8N6P7 574 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 RASSF8Q8NHQ8 419 aa15.53■□□□□ 0.08
UFD1-209ENST00000489406 FIBINQ8TAL6 211 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms