RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 DRD3P35462 400 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 HARS2P49590 506 aaKnown RBP9.52□□□□□ -0.89
SSBP1-212ENST00000489378 NDST1P52848 882 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 PDX1P52945 283 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 HMGN5P82970 282 aaKnown RBP9.52□□□□□ -0.89
SSBP1-212ENST00000489378 CYP24A1Q07973 514 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 KCNMA1Q12791 1236 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 PSMD6Q15008 389 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 TRIP4Q15650 581 aaPredicted RBP9.52□□□□□ -0.89
SSBP1-212ENST00000489378 SNRNP35Q16560 246 aaKnown RBP9.52□□□□□ -0.89
SSBP1-212ENST00000489378 ZNF699Q32M78 642 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 MCTP1Q6DN14 999 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 EFL1Q7Z2Z2 1120 aaKnown RBP9.52□□□□□ -0.89
SSBP1-212ENST00000489378 VASH2Q86V25 355 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 STK40Q8N2I9 435 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 TTC17Q96AE7 1141 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 ITPKCQ96DU7 683 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 LMLNQ96KR4 655 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 CDK5RAP1Q96SZ6 601 aaKnown RBP9.52□□□□□ -0.89
SSBP1-212ENST00000489378 MYOCQ99972 504 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 USP29Q9HBJ7 922 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 INTS6Q9UL03 887 aaKnown RBP9.52□□□□□ -0.89
SSBP1-212ENST00000489378 STRIP2Q9ULQ0 834 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 DMTF1Q9Y222 760 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 PLAAQ9Y263 795 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 USP3Q9Y6I4 520 aa9.52□□□□□ -0.89
SSBP1-212ENST00000489378 SPENQ96T58 3664 aaKnown RBP9.51□□□□□ -0.89
SSBP1-212ENST00000489378 CCDC187A0A096LP49 1063 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.51□□□□□ -0.89
SSBP1-212ENST00000489378 PRAMEF26H0Y7S4 382 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 SCAMP1O15126 338 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 CLSTN1O94985 981 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 IDEP14735 1019 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 POU3F2P20265 443 aaPredicted RBP9.51□□□□□ -0.89
SSBP1-212ENST00000489378 CASRP41180 1078 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 CSKP41240 450 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 CTSOP43234 321 aaPredicted RBP9.51□□□□□ -0.89
SSBP1-212ENST00000489378 ST8SIA6P61647 398 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 ZNF177Q13360 481 aaPredicted RBP9.51□□□□□ -0.89
SSBP1-212ENST00000489378 ALCAMQ13740 583 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 ARID5BQ14865 1188 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 DRAP1Q14919 205 aaPredicted RBP9.51□□□□□ -0.89
SSBP1-212ENST00000489378 NCAPHQ15003 741 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 ZNF542PQ5EBM4 170 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 ZNF667Q5HYK9 610 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 PERM1Q5SV97 790 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 RSRC2Q7L4I2 434 aaKnown RBP9.51□□□□□ -0.89
SSBP1-212ENST00000489378 C14orf80Q86SX3 495 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 PLD4Q96BZ4 506 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 TWNKQ96RR1 684 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 C1QTNF2Q9BXJ5 285 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 VRTNQ9H8Y1 702 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 PNPLA8Q9NP80 782 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 STOML2Q9UJZ1 356 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 LIMCH1Q9UPQ0 1083 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 PCDHGA7Q9Y5G6 932 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 LRRK1Q38SD2 2015 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 UBE4BO95155 1302 aa9.51□□□□□ -0.89
SSBP1-212ENST00000489378 FRMD3A2A2Y4 597 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 TARSL2A2RTX5 802 aaKnown RBP9.5□□□□□ -0.89
SSBP1-212ENST00000489378 TBL1XO60907 577 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 PHACTR2O75167 634 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 KIF20AO95235 890 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 IL1BP01584 269 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 PRLRP16471 622 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 MZF1P28698 734 aaPredicted RBP9.5□□□□□ -0.89
SSBP1-212ENST00000489378 LONP1P36776 959 aaKnown RBP9.5□□□□□ -0.89
SSBP1-212ENST00000489378 CASP4P49662 377 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 RIPPLY3P57055 190 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 RFWD3Q6PCD5 774 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 TRIM69Q86WT6 500 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 JAMLQ86YT9 394 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 SLC22A18ASQ8N1D0 253 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 TMEM145Q8NBT3 493 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 FAM131CQ96AQ9 280 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 CYFIP2Q96F07 1278 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 EPSTI1Q96J88 318 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 NOX5Q96PH1 765 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 KIAA1586Q9HCI6 787 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 SLCO3A1Q9UIG8 710 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 CELSR2Q9HCU4 2923 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 CSMD1Q96PZ7 3565 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 SCN8AQ9UQD0 1980 aa9.5□□□□□ -0.89
SSBP1-212ENST00000489378 EDDM13A0A1B0GTR0 161 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 GOLGA6L7A0A1B0GV03 622 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 NEMP2A6NFY4 417 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 PLD2O14939 933 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 SLC31A1O15431 190 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 PLRG1O43660 514 aaKnown RBP9.49□□□□□ -0.89
SSBP1-212ENST00000489378 TCEA3O75764 348 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 VNN1O95497 513 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 HGFP14210 728 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 VAV1P15498 845 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 NUDT1P36639 197 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 CYP2J2P51589 502 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 YWHAGP61981 247 aaKnown RBP eCLIP9.49□□□□□ -0.89
SSBP1-212ENST00000489378 BIRC3Q13489 604 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 NCOA4Q13772 614 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 MORC3Q14149 939 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms