RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RPL22P35268 128 aaKnown RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 ZNF57Q68EA5 555 aaPredicted RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 PRELID2Q8N945 189 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 UBASH3BQ8TF42 649 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 CEP44Q9C0F1 390 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 MAN1C1Q9NR34 630 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 VPS45Q9NRW7 570 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 INVSQ9Y283 1065 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 PSMD12O00232 456 aaPredicted RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 MAP3K13O43283 966 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 PFKFB4Q16877 469 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 RNF43Q68DV7 783 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 ZNF276Q8N554 614 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 PRDM4Q9UKN5 801 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 SPATA2Q9UM82 520 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 BDNFP23560 247 aa17.89■□□□□ 0.46
NPHP4-209ENST00000489180 FAM183BPQ6ZVS7 135 aa17.89■□□□□ 0.46
NPHP4-209ENST00000489180 CYP4Z2PQ8N1L4 340 aa17.89■□□□□ 0.46
NPHP4-209ENST00000489180 FLCNQ8NFG4 579 aa17.89■□□□□ 0.46
NPHP4-209ENST00000489180 ADAM30Q9UKF2 790 aa17.89■□□□□ 0.46
NPHP4-209ENST00000489180 CHADO15335 359 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 PGM3O95394 542 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 MYL4P12829 197 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 DMPKQ09013 629 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 PLCL1Q15111 1095 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 PARP6Q2NL67 630 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 NET1Q7Z628 596 aaPredicted RBP17.89■□□□□ 0.45
NPHP4-209ENST00000489180 ZDHHC13Q8IUH4 622 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 PIWIL2Q8TC59 973 aaKnown RBP17.89■□□□□ 0.45
NPHP4-209ENST00000489180 PPP1R13LQ8WUF5 828 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 HAS1Q92839 578 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 ULBP1Q9BZM6 244 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 ASB7Q9H672 318 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 POPDC2Q9HBU9 364 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 FBXO6Q9NRD1 293 aaPredicted RBP17.89■□□□□ 0.45
NPHP4-209ENST00000489180 MCM8Q9UJA3 840 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 PLA2G4CQ9UP65 541 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 DEPDC5O75140 1603 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 ZNF7P17097 686 aaPredicted RBP17.89■□□□□ 0.45
NPHP4-209ENST00000489180 CHN2P52757 468 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 ZIK1Q3SY52 487 aaPredicted RBP17.89■□□□□ 0.45
NPHP4-209ENST00000489180 TTC7BQ86TV6 843 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 TMEM132CQ8N3T6 1108 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 BAP1Q92560 729 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 TPRKBQ9Y3C4 175 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 PCDHB5Q9Y5E4 795 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 TSPAN8P19075 237 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 GRIA3P42263 894 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 EPHB3P54753 998 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 TRAF3Q13114 568 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 ZPBP2Q6X784 338 aa17.89■□□□□ 0.45
NPHP4-209ENST00000489180 ALYREFQ86V81 257 aaKnown RBP17.89■□□□□ 0.45
NPHP4-209ENST00000489180 MFN2O95140 757 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 COX4I1P13073 169 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 HPGDP15428 266 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 NAGLUP54802 743 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 NAB1Q13506 487 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 DGUOKQ16854 277 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 OMDQ99983 421 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 RGL2O15211 777 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 MED26O95402 600 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 URODP06132 367 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 ITGADQ13349 1161 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 UNC5AQ6ZN44 842 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 SPATA6LQ8N4H0 392 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 MAGEB10Q96LZ2 347 aaPredicted RBP17.88■□□□□ 0.45
NPHP4-209ENST00000489180 ADPRHL2Q9NX46 363 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 DIP2BQ9P265 1576 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 GSTT1P30711 240 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 SLC39A12Q504Y0 691 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 SCARA3Q6AZY7 606 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 SLCO1B3Q9NPD5 702 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 NCANO14594 1321 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 A0A087WXM4 84 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 MTIF3Q9H2K0 278 aaKnown RBP17.88■□□□□ 0.45
NPHP4-209ENST00000489180 SIGLEC16A6NMB1 481 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 VCLP18206 1134 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 PPP2R1BP30154 601 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 PREPLQ4J6C6 727 aaPredicted RBP17.88■□□□□ 0.45
NPHP4-209ENST00000489180 KHDRBS2Q5VWX1 349 aaKnown RBP17.88■□□□□ 0.45
NPHP4-209ENST00000489180 GPSM1Q86YR5 675 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 SETD9Q8NE22 299 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 TMEM159Q96B96 161 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 PRRG3Q9BZD7 231 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 ANAPC2Q9UJX6 822 aa17.88■□□□□ 0.45
NPHP4-209ENST00000489180 TNS2Q63HR2 1409 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 ADAMTS13Q76LX8 1427 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 FRMPD1Q5SYB0 1578 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 UBXN8O00124 270 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 TRUB2O95900 331 aaKnown RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 CYP1A1P04798 512 aaPredicted RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 CKBP12277 381 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 PIK3R1P27986 724 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 KPNA1P52294 538 aaPredicted RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 ATP12AP54707 1039 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 CXCL9Q07325 125 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 BST1Q10588 318 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 NFE2Q16621 373 aaPredicted RBP17.87■□□□□ 0.45
NPHP4-209ENST00000489180 C11orf88Q6PI97 169 aa17.87■□□□□ 0.45
NPHP4-209ENST00000489180 MTSS1LQ765P7 747 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms