RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 A0A1B0GVT2 93 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 TARSL2A2RTX5 802 aaKnown RBP14.4□□□□□ -0.1
VTI1A-206ENST00000489142 E9PAM4 449 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 F9P00740 461 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 IL1BP01584 269 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 UNGP13051 313 aaPredicted RBP14.4□□□□□ -0.1
VTI1A-206ENST00000489142 GLDCP23378 1020 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 NSFP46459 744 aaKnown RBP14.4□□□□□ -0.1
VTI1A-206ENST00000489142 CSNK1EP49674 416 aaKnown RBP14.4□□□□□ -0.1
VTI1A-206ENST00000489142 CDH4P55283 916 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 PTP4A2Q12974 167 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 SLC12A1Q13621 1099 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 ARID5BQ14865 1188 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 CLEC16AQ2KHT3 1053 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 CCDC14Q49A88 953 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 ARTNQ5T4W7 220 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 NCEH1Q6PIU2 408 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 LINGO4Q6UY18 593 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 Q6ZVU0 165 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 BNIPLQ7Z465 357 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 KDM1BQ8NB78 822 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 C1orf216Q8TAB5 229 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 FRS2Q8WU20 508 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 CAMK1GQ96NX5 476 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 PSMB7Q99436 277 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 OMDQ99983 421 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 MAGEB5Q9BZ81 275 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 NEUROG2Q9H2A3 272 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 NCKAP1Q9Y2A7 1128 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 TBC1D30Q9Y2I9 924 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 DOCK9Q9BZ29 2069 aa14.4□□□□□ -0.1
VTI1A-206ENST00000489142 A0A0D9SEW6 157 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 LRRC10BA6NIK2 292 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 K7ERQ8 282 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 TOP3BO95985 862 aaKnown RBP14.39□□□□□ -0.11
VTI1A-206ENST00000489142 MT-CO1P00395 513 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 IGHV4-34P06331 123 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 C7P10643 843 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 CD59P13987 128 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 SPINK2P20155 84 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 CSRP1P21291 193 aaKnown RBP14.39□□□□□ -0.11
VTI1A-206ENST00000489142 PMLP29590 882 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 NNMTP40261 264 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 FAM193AP78312 1265 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 SULT2A1Q06520 285 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 FOXC1Q12948 553 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 SEMA3BQ13214 749 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 MTA1Q13330 715 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 DLG2Q15700 870 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 LRRC31Q6UY01 552 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 TRIM72Q6ZMU5 477 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 OR7D4Q8NG98 312 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 NAT10Q9H0A0 1025 aaKnown RBP14.39□□□□□ -0.11
VTI1A-206ENST00000489142 SGK2Q9HBY8 427 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 TM9SF3Q9HD45 589 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 DNAAF2Q9NVR5 837 aaKnown RBP14.39□□□□□ -0.11
VTI1A-206ENST00000489142 ADAM22Q9P0K1 906 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 VPS51Q9UID3 782 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 SARDHQ9UL12 918 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 PAXBP1Q9Y5B6 917 aa14.39□□□□□ -0.11
VTI1A-206ENST00000489142 C2CD4BA6NLJ0 364 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 DRGXA6NNA5 263 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 GJB3O75712 270 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 CEACAM1P13688 526 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 RRM1P23921 792 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 OR1E1P30953 314 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 SDC4P31431 198 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 GALCP54803 685 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 OXCT1P55809 520 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 ELAVL3Q14576 367 aaKnown RBP14.38□□□□□ -0.11
VTI1A-206ENST00000489142 KCNT1Q5JUK3 1230 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 KIAA0895LQ68EN5 471 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 LRSAM1Q6UWE0 723 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 USP30Q70CQ3 517 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 PIP4P1Q86T03 277 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 DNAAF5Q86Y56 855 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 DRC7Q8IY82 874 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 SH2D3CQ8N5H7 860 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 CCDC185Q8N715 623 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 OR14C36Q8NHC7 312 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 FAM172AQ8WUF8 416 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 AGPAT1Q99943 283 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 ORAI3Q9BRQ5 295 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 SELENOOQ9BVL4 669 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 PCED1AQ9H1Q7 454 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 GAREM1Q9H706 876 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 SCML1Q9UN30 329 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 FNDC3AQ9Y2H6 1198 aaKnown RBP14.38□□□□□ -0.11
VTI1A-206ENST00000489142 DAAM1Q9Y4D1 1078 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 PCNX2A6NKB5 2137 aa14.38□□□□□ -0.11
VTI1A-206ENST00000489142 CHD8Q9HCK8 2581 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 IGLV3-10A0A075B6K4 115 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 FAM72CH0Y354 149 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 KCNK3O14649 394 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 SMAD6O43541 496 aaKnown RBP14.37□□□□□ -0.11
VTI1A-206ENST00000489142 ATP9BO43861 1147 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 SH3BP5O60239 455 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 RTN2O75298 545 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 ENDOD1O94919 500 aa14.37□□□□□ -0.11
VTI1A-206ENST00000489142 ADH1BP00325 375 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms