RNA–Protein interactions for RNA: ENST00000488944.5

WDR46-238, Transcript of WD repeat domain 46, human

TSL 3

Gene WDR46, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-238	ENST00000488944	DFNA5	O60443	496 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	RTN2	O75298	545 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	ITGAV	P06756	1048 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	TBC1D3H	P0C7X1	549 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	PNMA6A	P0CW24	399 aa	Predicted RBP	13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	ABCB4	P21439	1286 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	MAT2A	P31153	395 aa	Known RBP	13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	CCR1	P32246	355 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	PLK1	P53350	603 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	DNAJC3	Q13217	504 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	NME3	Q13232	169 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	CAMK2B	Q13554	666 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	SLC12A1	Q13621	1099 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	ACCSL	Q4AC99	568 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	TBC1D3G	Q6DHY5	549 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	OR6B2	Q6IFH4	312 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	TBC1D3C	Q6IPX1	549 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	GBP6	Q6ZN66	633 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	FRS2	Q8WU20	508 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	SHC3	Q92529	594 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	SKA1	Q96BD8	255 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	ALG14	Q96F25	216 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	SPAG5	Q96R06	1193 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	GDF3	Q9NR23	364 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	APEX2	Q9UBZ4	518 aa		13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	TDRD6	O60522	2096 aa	Known RBP	13.28	□□□□□ -0.28
WDR46-238	ENST00000488944	ENC1	O14682	589 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	BNIP3L	O60238	219 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	HSF2BP	O75031	334 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	FGFR1OP	O95684	399 aa	Known RBP	13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	ERBB2	P04626	1255 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	GLI1	P08151	1106 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	SLC2A3	P11169	496 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	EPHA8	P29322	1005 aa	Predicted RBP	13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	NXPH1	P58417	271 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	SULT2A1	Q06520	285 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	BNIP3	Q12983	259 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	AUH	Q13825	339 aa	Known RBP	13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	SMAD1	Q15797	465 aa	Known RBP	13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	CAMK4	Q16566	473 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	EFHC1	Q5JVL4	640 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	OLFML1	Q6UWY5	402 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944		Q6ZVU0	165 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	C14orf80	Q86SX3	495 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	PDZD3	Q86UT5	571 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	EID2	Q8N6I1	236 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	SAP25	Q8TEE9	199 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	OR8D1	Q8WZ84	308 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	CNDP2	Q96KP4	475 aa	Known RBP	13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	PLCB1	Q9NQ66	1216 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	ASNSD1	Q9NWL6	643 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	SLC25A13	Q9UJS0	675 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	HS3ST4	Q9Y661	456 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944	ASXL3	Q9C0F0	2248 aa		13.27	□□□□□ -0.29
WDR46-238	ENST00000488944		M0QYT0	321 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	TLR4	O00206	839 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	LAT	O43561	262 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	PAGE1	O75459	146 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	DAB1	O75553	588 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	LDOC1	O95751	146 aa	Predicted RBP	13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	TFE3	P19532	575 aa	Predicted RBP	13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	PON1	P27169	355 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	CNTN1	Q12860	1018 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	DLG2	Q15700	870 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	EXOC3L4	Q17RC7	722 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	PTPN20	Q4JDL3	420 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	OTUD1	Q5VV17	481 aa	Predicted RBP	13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	NAPEPLD	Q6IQ20	393 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	SPATS2	Q86XZ4	545 aa	Known RBP	13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	IRF2BP1	Q8IU81	584 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	PIP4K2C	Q8TBX8	421 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	FEM1A	Q9BSK4	669 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	SIK2	Q9H0K1	926 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	SIX2	Q9NPC8	291 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	ANLN	Q9NQW6	1124 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	ARHGAP20	Q9P2F6	1191 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	DKK4	Q9UBT3	224 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	RWDD2A	Q9UIY3	292 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	VPS28	Q9UK41	221 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	PCDHGC3	Q9UN70	934 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	CA5B	Q9Y2D0	317 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	SNX10	Q9Y5X0	201 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	IGSF10	Q6WRI0	2623 aa		13.26	□□□□□ -0.29
WDR46-238	ENST00000488944	LOC400499	M0QZD8	3231 aa		13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	PLRG1	O43660	514 aa	Known RBP	13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	ATP9B	O43861	1147 aa		13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	SNAP91	O60641	907 aa		13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	CNTN5	O94779	1100 aa		13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	MTIF2	P46199	727 aa	Known RBP	13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	ARRB1	P49407	418 aa	Predicted RBP	13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	OXCT1	P55809	520 aa		13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	SLC6A3	Q01959	620 aa		13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	PTK2	Q05397	1052 aa		13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	ZNF177	Q13360	481 aa	Predicted RBP	13.25	□□□□□ -0.29
WDR46-238	ENST00000488944	SLC45A4	Q5BKX6	768 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms