RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	IDH3B	O43837	385 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CALU	O43852	315 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SNAP91	O60641	907 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UGT1A9	O60656	530 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SNN	O75324	88 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GCAT	O75600	419 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	AKAP3	O75969	853 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SLITRK5	O94991	958 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MED26	O95402	600 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	STAMBP	O95630	424 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	APOE	P02649	317 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CHRNB1	P11230	501 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MYL4	P12829	197 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	EEF2	P13639	858 aa	Known RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	P4HA1	P13674	534 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CCDC130	P13994	396 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PHKG2	P15735	406 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PSMC3	P17980	439 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UGT1A6	P19224	532 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TNFAIP3	P21580	790 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	BGN	P21810	368 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UGT1A1	P22309	533 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UGT1A4	P22310	534 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UGT1A3	P35503	534 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UGT1A5	P35504	534 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	COPA	P53621	1224 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ARHGAP8	P85298	464 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CDKL1	Q00532	357 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CD300C	Q08708	224 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	DMPK	Q09013	629 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PDIA2	Q13087	525 aa	Known RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TUBB3	Q13509	450 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ATP1A4	Q13733	1029 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GK3P	Q14409	553 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MORF4L2	Q15014	288 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ACAP1	Q15027	740 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TRIP13	Q15645	432 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CYP2A13	Q16696	494 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SLC35G1	Q2M3R5	365 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	LETM2	Q2VYF4	491 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	KLHL38	Q2WGJ6	581 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	FBLN7	Q53RD9	439 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SLX4IP	Q5VYV7	408 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ITPRIPL1	Q6GPH6	555 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	OGFOD2	Q6N063	350 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PPP4R4	Q6NUP7	873 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GJB7	Q6PEY0	223 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	IYD	Q6PHW0	289 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	KRT27	Q7Z3Y8	459 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GPR141	Q7Z602	305 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CLEC10A	Q8IUN9	316 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	FBXW8	Q8N3Y1	598 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ESX1	Q8N693	406 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TRIML2	Q8N7C3	387 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ZNF713	Q8N859	430 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	KCT2	Q8NC54	265 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	DNAJB8	Q8NHS0	232 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ETNPPL	Q8TBG4	499 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CYB5D2	Q8WUJ1	264 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	DCAKD	Q8WVC6	231 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TRIB2	Q92519	343 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	DLG3	Q92796	817 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	RPGR	Q92834	1020 aa	Known RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TMIGD2	Q96BF3	282 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TMA16	Q96EY4	203 aa	Known RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ZNF597	Q96LX8	424 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	KCNK16	Q96T55	309 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	RIOK1	Q9BRS2	568 aa	Known RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	OSBPL11	Q9BXB4	747 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ANO3	Q9BYT9	981 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	RPF2	Q9H7B2	306 aa	Known RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UGT1A7	Q9HAW7	530 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UGT1A10	Q9HAW8	530 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UGT1A8	Q9HAW9	530 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MOV10	Q9HCE1	1003 aa	Known RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SAYSD1	Q9NPB0	183 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	OLFML3	Q9NRN5	406 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GPRC5D	Q9NZD1	345 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SUCO	Q9UBS9	1254 aa	Known RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	APEX2	Q9UBZ4	518 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	EBF1	Q9UH73	591 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	VPS28	Q9UK41	221 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GTF3C4	Q9UKN8	822 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MYRF	Q9Y2G1	1151 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	RNF11	Q9Y3C5	154 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ASTN1	O14525	1302 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	EMSY	Q7Z589	1322 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PLIN4	Q96Q06	1357 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	NHS	Q6T4R5	1651 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ZNFX1	Q9P2E3	1918 aa	Known RBP	4.86	□□□□□ -1.63
CDC42BPA-213	ENST00000488131		A0A1B0GTW7	788 aa		4.86	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	C2orf71	A6NGG8	1288 aa		4.86	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ARHGAP42	A6NI28	874 aa		4.86	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MEI4	A8MW99	385 aa		4.86	□□□□□ -1.63
CDC42BPA-213	ENST00000488131		H3BMQ9	156 aa		4.86	□□□□□ -1.63
CDC42BPA-213	ENST00000488131		I3L4J1	428 aa		4.86	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ENPP3	O14638	875 aa		4.86	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	AREL1	O15033	823 aa		4.86	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CLOCK	O15516	846 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms