RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 GALNT7Q86SF2 657 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 LRRTM4Q86VH4 590 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 ZNF575Q86XF7 245 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 NME8Q8N427 588 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 USP38Q8NB14 1042 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 FAM110DQ8TAY7 271 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 TWNKQ96RR1 684 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 TUBB6Q9BUF5 446 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 AAMDCQ9H7C9 122 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 ZNF69Q9UC07 566 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 GJD2Q9UKL4 321 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 LAMP3Q9UQV4 416 aa4.23□□□□□ -1.73
ECHDC1-217ENST00000488087 ZNF335Q9H4Z2 1342 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 TCRBV7S3A2A0A539 114 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 VWA3AA6NCI4 1184 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 KCNJ18B7U540 433 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 PEX12O00623 359 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 PRPF4O43172 522 aaKnown RBP eCLIP4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 KLK10O43240 276 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 TLR2O60603 784 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 TSPAN3O60637 253 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 METTL18O95568 372 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 HLA-DQA2P01906 255 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 POLBP06746 335 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 CNPP09543 421 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 WEE2P0C1S8 567 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 TYK2P29597 1187 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 AVPR2P30518 371 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 CYP2J2P51589 502 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 ARHGAP8P85298 464 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 RALBP1Q15311 655 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 DLGAP5Q15398 846 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 KIAA1755Q5JYT7 1200 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 MAP3K21Q5TCX8 1036 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 FAM171A1Q5VUB5 890 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 PAPD7Q5XG87 772 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 DENND1BQ6P3S1 775 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 SHC4Q6S5L8 630 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 B4GALNT4Q76KP1 1039 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 CCDC25Q86WR0 208 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 BRSK2Q8IWQ3 736 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 NANOGP1Q8N7R0 232 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 DENND1AQ8TEH3 1009 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 C2CD4CQ8TF44 421 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 KAT2AQ92830 837 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 ZNF419Q96HQ0 510 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 REEP2Q9BRK0 252 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 PIMREGQ9BSJ6 248 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 CADM1Q9BY67 442 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 SLC29A3Q9BZD2 475 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 CTDSP1Q9GZU7 261 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 SLC22A11Q9NSA0 550 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 TMEM248Q9NWD8 314 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 TUBA8Q9NY65 449 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 C9orf78Q9NZ63 289 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 PDP2Q9P2J9 529 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 PNMA2Q9UL42 364 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 GDAQ9Y2T3 454 aa4.22□□□□□ -1.73
ECHDC1-217ENST00000488087 STRNO43815 780 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 PYGLP06737 847 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 KLRC2P26717 231 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 RHAGQ02094 409 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 ZBTB16Q05516 673 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 PMPCAQ10713 525 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 BYSLQ13895 437 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 AP5B1Q2VPB7 878 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 MIDNQ504T8 468 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 ALG10Q5BKT4 473 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 ALG10BQ5I7T1 473 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 COLEC12Q5KU26 742 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 PXDC1Q5TGL8 231 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 ATG16L1Q676U5 607 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 ISM2Q6H9L7 571 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 DEF8Q6ZN54 512 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 CPOQ8IVL8 374 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 DDIASQ8IXT1 998 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 TMEM217Q8N7C4 229 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 HERVK_113Q902F9 699 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 NCSTNQ92542 709 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 RPL36ALQ969Q0 106 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 MASTLQ96GX5 879 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 MAELQ96JY0 434 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 IFT27Q9BW83 186 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 STN1Q9H668 368 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 TLR8Q9NR97 1041 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 THSD1Q9NS62 852 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 SLC13A4Q9UKG4 626 aa4.21□□□□□ -1.74
ECHDC1-217ENST00000488087 ZMYM2Q9UBW7 1377 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 KIR2DS5A0A0G2JLQ3 304 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 CCDC196A0A1B0GTZ2 297 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 TMEM247A6NEH6 219 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 DNAJC9-AS1A6NH13 148 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 KIR2DS3K7RE56 304 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 HBP1O60381 514 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 FGBP02675 491 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 FCGR2AP12318 317 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 ARSAP15289 507 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 XBP1P17861 261 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms