RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 ALDH1A2O94788 518 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 CAVIN2O95810 425 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 GYPCP04921 128 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 EPHX1P07099 455 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 SLC2A3P11169 496 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 PDGFRAP16234 1089 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 TNFAIP3P21580 790 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 MZF1P28698 734 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 RDXP35241 583 aaKnown RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 SOX11P35716 441 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 P2RY2P41231 377 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 STK19P49842 368 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 HDAC4P56524 1084 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 GSCP56915 257 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 RPL7AP62424 266 aaKnown RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 TPM4P67936 248 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 OGDHQ02218 1023 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 FNDC3BQ53EP0 1204 aaKnown RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 USP39Q53GS9 565 aaKnown RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 ALFQ53S48 1182 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 PITRM1Q5JRX3 1037 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 BRMS1LQ5PSV4 323 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 HGSNATQ68CP4 663 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 PMS2CLQ68D20 193 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 ACAD10Q6JQN1 1059 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 LRSAM1Q6UWE0 723 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 KIAA1324Q6UXG2 1013 aaKnown RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 SERPINA13PQ6UXR4 307 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 ARCQ7LC44 396 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 MCOLN2Q8IZK6 566 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 AHI1Q8N157 1196 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 CCDC185Q8N715 623 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 C3orf20Q8ND61 904 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 WFIKKN2Q8TEU8 576 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 CPLX3Q8WVH0 158 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 POM121Q96HA1 1249 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 MRGPRX3Q96LB0 322 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 RPRD1AQ96P16 312 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-209ENST00000487244 MCEEQ96PE7 176 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 TRIM7Q9C029 511 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 TMEM245Q9H330 911 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 WDCPQ9H6R7 721 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 RRN3Q9NYV6 651 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 AIPL1Q9NZN9 384 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 MPP6Q9NZW5 540 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 GMEB2Q9UKD1 530 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 RAB23Q9ULC3 237 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 NEU3Q9UQ49 428 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 DOCK9Q9BZ29 2069 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 CACNA1AO00555 2505 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 CACNA1EQ15878 2313 aa7.38□□□□□ -1.23
UBE4B-209ENST00000487244 TP53BP1Q12888 1972 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-209ENST00000487244 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 IGHV1OR15-9A0A0B4J2B8 117 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 A0A1B0GVM2 712 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 A0A1W2PQJ5 194 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 TCAF2A6NFQ2 919 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 TTC34A8MYJ7 566 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 E9PAM4 449 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 FAM72CH0Y354 149 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 AP5Z1O43299 807 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 CCP110O43303 1012 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 ENDOD1O94919 500 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 EPN2O95208 641 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 F9P00740 461 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 CALB1P05937 261 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 RETP07949 1114 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 DLDP09622 509 aaKnown RBP7.37□□□□□ -1.23
UBE4B-209ENST00000487244 KRT3P12035 628 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 VAV1P15498 845 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 POLR2EP19388 210 aaKnown RBP7.37□□□□□ -1.23
UBE4B-209ENST00000487244 GPD1P21695 349 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 SDC4P31431 198 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 PRKCIP41743 596 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 PTGER3P43115 390 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 PTPN9P43378 593 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 COPAP53621 1224 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 KLHL30Q0D2K2 578 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 ZNF252P-AS1Q0IIN9 211 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 PLEKHG6Q3KR16 790 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 C5orf22Q49AR2 442 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 FIGNQ5HY92 759 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 RABGAP1LQ5R372 815 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 FAM72AQ5TYM5 149 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 TCEAL6Q6IPX3 200 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 SDE2Q6IQ49 451 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 FAM72DQ6L9T8 149 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 DNAJC24Q6P3W2 148 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 WDR59Q6PJI9 974 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 SND1Q7KZF4 910 aaKnown RBP eCLIP7.37□□□□□ -1.23
UBE4B-209ENST00000487244 ARMCX6Q7L4S7 300 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 TFAP2DQ7Z6R9 452 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 FAM72BQ86X60 149 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 TMEFF1Q8IYR6 380 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 DEFB119Q8N690 84 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 FAM172AQ8WUF8 416 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 UCMAQ8WVF2 138 aa7.37□□□□□ -1.23
UBE4B-209ENST00000487244 CENPIQ92674 756 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-209ENST00000487244 TCEAL3Q969E4 200 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms