RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 TMEM102Q8N9M5 508 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 BPIFB6Q8NFQ5 453 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 JOSD2Q8TAC2 188 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 GABPB2Q8TAK5 448 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 LRRN4Q8WUT4 740 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SORT1Q99523 831 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 CGREF1Q99674 301 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SLC29A1Q99808 456 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 HERC2P3Q9BVR0 1158 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 WDR12Q9GZL7 423 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 TASP1Q9H6P5 420 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PCDH12Q9NPG4 1184 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 ACSS2Q9NR19 701 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 OLAHQ9NV23 265 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 PIH1D1Q9NWS0 290 aaKnown RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 HESX1Q9UBX0 185 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 MAGED2Q9UNF1 606 aaPredicted RBP6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SATB2Q9UPW6 733 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 ERVK-11Q9UQG0 969 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 SNX5Q9Y5X3 404 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 ST14Q9Y5Y6 855 aa6.36□□□□□ -1.39
VPS13D-209ENST00000487188 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 LRRIQ4A6NIV6 560 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 FAM159BA6NKW6 160 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 FAM47E-STBD1D6RA91 191 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 H0YCG3 227 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 PLOD2O00469 737 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ASNA1O43681 348 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CLPXO76031 633 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 KCNH1O95259 989 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 KRT8P05787 483 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 C8BP07358 591 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 GARTP22102 1010 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 NR4A1P22736 598 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 PSMA4P25789 261 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ARL1P40616 181 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SERPINB10P48595 397 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 RPL14P50914 215 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CACNB3P54284 484 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 YWHAEP62258 255 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CRADDP78560 199 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 MRPS15P82914 257 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CD300CQ08708 224 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 NFATC3Q12968 1075 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 TRIM25Q14258 630 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CARTPTQ16568 116 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ZACNQ401N2 412 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM179Q6ZVK1 233 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 TAS2R42Q7RTR8 314 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SAPCD2Q86UD0 394 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 IGFN1Q86VF2 1251 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 TICAM1Q8IUC6 712 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 TTLL6Q8N841 843 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM161BQ8NDZ6 487 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ASB9Q96DX5 294 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 DACH2Q96NX9 599 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 MXRA8Q9BRK3 442 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 C9orf16Q9BUW7 83 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ANKRD60Q9BZ19 345 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 DDX28Q9NUL7 540 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF358Q9NW07 568 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 GPATCH2LQ9NWQ4 482 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM9Q9P0T7 183 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 NXF1Q9UBU9 619 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 PCDHGC3Q9UN70 934 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 NOTOA8MTQ0 251 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 M0R3G1 203 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 MED7O43513 233 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 DLGAP3O95886 979 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ALBP02768 609 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ALDH2P05091 517 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 KRT19P08727 400 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CD247P20963 164 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 FASP25445 335 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 IL1R2P27930 398 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SPRP35270 261 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 HARS2P49590 506 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CSE1LP55060 971 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SOX10P56693 466 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 EN1Q05925 392 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 PRKAA1Q13131 559 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 AGKQ53H12 422 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SLC10A5Q5PT55 438 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 HEATR6Q6AI08 1181 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 OR6B2Q6IFH4 312 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 ANKRD26P1Q6NSI1 321 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 LYSMD3Q7Z3D4 306 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 AKAP14Q86UN6 197 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 MPP5Q8N3R9 675 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 EFHD2Q96C19 240 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 NPLQ9BXD5 320 aaPredicted RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 CCDC90BQ9GZT6 254 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 NAA50Q9GZZ1 169 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 SDCBP2Q9H190 292 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 GBA3Q9H227 469 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 FANCEQ9HB96 536 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 TAF1LQ8IZX4 1826 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 DDX60LQ5H9U9 1706 aaKnown RBP6.35□□□□□ -1.39
VPS13D-209ENST00000487188 FAM149AA5PLN7 773 aa6.35□□□□□ -1.39
VPS13D-209ENST00000487188 KCNU1A8MYU2 1149 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms