RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 TMEM216Q9P0N5 145 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 COX16Q9P0S2 106 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 PSAT1Q9Y617 370 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 MEIS3P2A8K0S8 358 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 PPEF2O14830 753 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 SNNO75324 88 aaPredicted RBP15.18■□□□□ 0.02
TTC3-219ENST00000485402 CST5P28325 142 aaPredicted RBP15.18■□□□□ 0.02
TTC3-219ENST00000485402 PCBP1Q15365 356 aaKnown RBP eCLIP15.18■□□□□ 0.02
TTC3-219ENST00000485402 ZFP42Q96MM3 310 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 EBNA1BP2Q99848 306 aaKnown RBP15.18■□□□□ 0.02
TTC3-219ENST00000485402 WDR55Q9H6Y2 383 aaPredicted RBP15.18■□□□□ 0.02
TTC3-219ENST00000485402 GOLGA2P5Q9HBQ8 144 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 ERVK-10P10266 1014 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 RALBP11234 206 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 MLH1P40692 756 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 ASPAP45381 313 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 PDE1CQ14123 709 aaPredicted RBP15.18■□□□□ 0.02
TTC3-219ENST00000485402 TBCCQ15814 346 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 UBXN11Q5T124 520 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 C6orf52Q5T4I8 152 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 C12orf29Q8N999 325 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 DTNBP1Q96EV8 351 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 MARK4Q96L34 752 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 CDRT15Q96T59 188 aa15.18■□□□□ 0.02
TTC3-219ENST00000485402 FRMD8P1Q9BZ68 369 aaPredicted RBP15.18■□□□□ 0.02
TTC3-219ENST00000485402 SRGAP2BP0DMP2 458 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 FDFT1P37268 417 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 PGGT1BP53609 377 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 ATXN1P54253 815 aaKnown RBP15.17■□□□□ 0.02
TTC3-219ENST00000485402 RBP5P82980 135 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 NADK2Q4G0N4 442 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 PPM1LQ5SGD2 360 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 TMC7Q7Z402 723 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 MAVSQ7Z434 540 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 SCUBE3Q8IX30 993 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 LPPQ93052 612 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 DCUN1D1Q96GG9 259 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 SNX27Q96L92 541 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 LENG8Q96PV6 779 aaPredicted RBP15.17■□□□□ 0.02
TTC3-219ENST00000485402 UNC93B1Q9H1C4 597 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 TRDMT1O14717 391 aaKnown RBP15.17■□□□□ 0.02
TTC3-219ENST00000485402 AMHP03971 560 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 FGF3P11487 239 aaPredicted RBP15.17■□□□□ 0.02
TTC3-219ENST00000485402 TSHRP16473 764 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 PTPN11Q06124 597 aaPredicted RBP15.17■□□□□ 0.02
TTC3-219ENST00000485402 FBXW8Q8N3Y1 598 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 PCDH19Q8TAB3 1148 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 RAB3IL1Q8TBN0 382 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 DGCR14Q96DF8 476 aaKnown RBP15.17■□□□□ 0.02
TTC3-219ENST00000485402 AGAP3Q96P47 875 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 SENP6Q9GZR1 1112 aaPredicted RBP15.17■□□□□ 0.02
TTC3-219ENST00000485402 C1orf21Q9H246 121 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 FAM49BQ9NUQ9 324 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 PADI3Q9ULW8 664 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 ARHGAP26Q9UNA1 814 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 SNX9Q9Y5X1 595 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 ITGA2BP08514 1039 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 COX4I1P13073 169 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 PRKCHP24723 683 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 PDK1Q15118 436 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 MBLAC2Q68D91 279 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 ARRDC4Q8NCT1 418 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 FAM156AQ8NDB6 213 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 ZSCAN18Q8TBC5 510 aaPredicted RBP15.17■□□□□ 0.02
TTC3-219ENST00000485402 SIGLEC10Q96LC7 697 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 DEFB118Q96PH6 123 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 SDCBP2Q9H190 292 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 COG4Q9H9E3 785 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 DNAJB4Q9UDY4 337 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 ZNF180Q9UJW8 692 aa15.17■□□□□ 0.02
TTC3-219ENST00000485402 SMIM28A0A1B0GU29 152 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 C1QAP02745 245 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 ALDOAP04075 364 aaKnown RBP15.16■□□□□ 0.02
TTC3-219ENST00000485402 ARRB2P32121 409 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 FAM91A1Q658Y4 838 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 TRNP1Q6NT89 227 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 SMG8Q8ND04 991 aaKnown RBP15.16■□□□□ 0.02
TTC3-219ENST00000485402 BEST2Q8NFU1 509 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 MRPL1Q9BYD6 325 aaKnown RBP15.16■□□□□ 0.02
TTC3-219ENST00000485402 UBAP1Q9NZ09 502 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 PCDHGC3Q9UN70 934 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 SSX2IPQ9Y2D8 614 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 A0A1W2PQ45 241 aaPredicted RBP15.16■□□□□ 0.02
TTC3-219ENST00000485402 A0A1W2PQY0 241 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 ASLP04424 464 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 MGAT1P26572 445 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 OLIG2Q13516 323 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 FLOT2Q14254 428 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 NRF1Q16656 503 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 ZNF618Q5T7W0 954 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 ZNF781Q8N8C0 355 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 CDKL2Q92772 493 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 HAPLN3Q96S86 360 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 CNPY3Q9BT09 278 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 UNKQ9C0B0 810 aaKnown RBP15.16■□□□□ 0.02
TTC3-219ENST00000485402 ELOVL4Q9GZR5 314 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.16■□□□□ 0.022e-10■□□□□ 9.5
TTC3-219ENST00000485402 PLEKHA5Q9HAU0 1116 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 CACNG4Q9UBN1 327 aa15.16■□□□□ 0.02
TTC3-219ENST00000485402 ITGA11Q9UKX5 1188 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms