RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PCDHGC3Q9UN70 934 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 HS3ST4Q9Y661 456 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 GOLGA4Q13439 2230 aaKnown RBP19.81■□□□□ 0.76
COL27A1-205ENST00000485397 DMXL2Q8TDJ6 3036 aa19.81■□□□□ 0.76
COL27A1-205ENST00000485397 RTN2O75298 545 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 ERBB2P04626 1255 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 ITGAVP06756 1048 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 PON1P27169 355 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 NME3Q13232 169 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 CAMK2BQ13554 666 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 COL9A2Q14055 689 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-205ENST00000485397 SMAD1Q15797 465 aaKnown RBP19.8■□□□□ 0.76
COL27A1-205ENST00000485397 EXOC3L4Q17RC7 722 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 INAVAQ3KP66 663 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 ACCSLQ4AC99 568 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 OLFML1Q6UWY5 402 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 C11orf57Q6ZUT1 292 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-205ENST00000485397 SAP25Q8TEE9 199 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 SPAG5Q96R06 1193 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 GDF3Q9NR23 364 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 KIAA1468Q9P260 1216 aa19.8■□□□□ 0.76
COL27A1-205ENST00000485397 APC2O95996 2303 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 ADAMTS20P59510 1910 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-205ENST00000485397 PNMA6AP0CW24 399 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-205ENST00000485397 OXCT1P55809 520 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 PTK2Q05397 1052 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 CYP4F3Q08477 520 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 ZNF177Q13360 481 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-205ENST00000485397 COL28A1Q2UY09 1125 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 POM121L1PQ3SYA9 428 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 PTPN20Q4JDL3 420 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 OR8D1Q8WZ84 308 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 FAM131CQ96AQ9 280 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 FEM1AQ9BSK4 669 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 SIX2Q9NPC8 291 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 OR51B4Q9Y5P0 310 aa19.79■□□□□ 0.76
COL27A1-205ENST00000485397 ACACAQ13085 2346 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 TP53BP1Q12888 1972 aaPredicted RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 TLR4O00206 839 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 ENC1O14682 589 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 LATO43561 262 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 ATP9BO43861 1147 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 PAGE1O75459 146 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 DAB1O75553 588 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 LDOC1O95751 146 aaPredicted RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 MAT2AP31153 395 aaKnown RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 MTIF2P46199 727 aaKnown RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 VASPP50552 380 aaPredicted RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 CLDN6P56747 220 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 NXPH1P58417 271 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 SLC6A3Q01959 620 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 BNIP3Q12983 259 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 DNAJC3Q13217 504 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 DLG2Q15700 870 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 OTUD1Q5VV17 481 aaPredicted RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 PRPF39Q86UA1 669 aaKnown RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 EID2Q8N6I1 236 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 HNRNPLLQ8WVV9 542 aaKnown RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 CNDP2Q96KP4 475 aaKnown RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 NOX5Q96PH1 765 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 SIK2Q9H0K1 926 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 PLCB1Q9NQ66 1216 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 ARHGAP20Q9P2F6 1191 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 SLC25A13Q9UJS0 675 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 DNAJC12Q9UKB3 198 aa19.78■□□□□ 0.76
COL27A1-205ENST00000485397 ANKRD11Q6UB99 2663 aaPredicted RBP19.78■□□□□ 0.76
COL27A1-205ENST00000485397 NYNRINQ9P2P1 1898 aaKnown RBP19.77■□□□□ 0.76
COL27A1-205ENST00000485397 GTPBP10A4D1E9 387 aaKnown RBP19.77■□□□□ 0.76
COL27A1-205ENST00000485397 M0QYT0 321 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 FOXN3O00409 490 aaPredicted RBP19.77■□□□□ 0.76
COL27A1-205ENST00000485397 PLRG1O43660 514 aaKnown RBP19.77■□□□□ 0.76
COL27A1-205ENST00000485397 BNIP3LO60238 219 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 EPHA8P29322 1005 aaPredicted RBP19.77■□□□□ 0.76
COL27A1-205ENST00000485397 NOS2P35228 1153 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 CLCN1P35523 988 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 KRT9P35527 623 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 CNTN1Q12860 1018 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 SLC45A4Q5BKX6 768 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 FAM46CQ5VWP2 391 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 NAPEPLDQ6IQ20 393 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 Q6ZVU0 165 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 SLC26A9Q7LBE3 791 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 DSG4Q86SJ6 1040 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 SLC47A2Q86VL8 602 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 SPATS2Q86XZ4 545 aaKnown RBP19.77■□□□□ 0.76
COL27A1-205ENST00000485397 PIP4K2CQ8TBX8 421 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 PPP1R9BQ96SB3 815 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 ANLNQ9NQW6 1124 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 DKK4Q9UBT3 224 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 VPS28Q9UK41 221 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 PPM1HQ9ULR3 514 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 TPX2Q9ULW0 747 aaKnown RBP19.77■□□□□ 0.76
COL27A1-205ENST00000485397 SNX10Q9Y5X0 201 aa19.77■□□□□ 0.76
COL27A1-205ENST00000485397 SLC7A4O43246 635 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 CLDN11O75508 207 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 CNTN5O94779 1100 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 ZNF18P17022 549 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 TFE3P19532 575 aaPredicted RBP19.76■□□□□ 0.75
COL27A1-205ENST00000485397 C5orf22Q49AR2 442 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms