RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 IKBKGQ9Y6K9 419 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.33
CTSA-207ENST00000484855 COCHO43405 550 aa17.08■□□□□ 0.33
CTSA-207ENST00000484855 SUN1O94901 812 aa17.08■□□□□ 0.33
CTSA-207ENST00000484855 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.33
CTSA-207ENST00000484855 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.33
CTSA-207ENST00000484855 NDST2P52849 883 aa17.08■□□□□ 0.33
CTSA-207ENST00000484855 CREMQ03060 361 aa17.08■□□□□ 0.33
CTSA-207ENST00000484855 NADSYN1Q6IA69 706 aa17.08■□□□□ 0.33
CTSA-207ENST00000484855 KLHDC10Q6PID8 442 aa17.08■□□□□ 0.33
CTSA-207ENST00000484855 PRPF39Q86UA1 669 aaKnown RBP17.08■□□□□ 0.33
CTSA-207ENST00000484855 ATXN2LQ8WWM7 1075 aaKnown RBP17.08■□□□□ 0.33
CTSA-207ENST00000484855 TRIM56Q9BRZ2 755 aaKnown RBP17.08■□□□□ 0.33
CTSA-207ENST00000484855 ZBP1Q9H171 429 aa17.08■□□□□ 0.33
CTSA-207ENST00000484855 NOL6Q9H6R4 1146 aaKnown RBP17.08■□□□□ 0.33
CTSA-207ENST00000484855 STK39Q9UEW8 545 aa17.08■□□□□ 0.33
CTSA-207ENST00000484855 INSL5Q9Y5Q6 135 aa17.08■□□□□ 0.33
CTSA-207ENST00000484855 TEX28O15482 410 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 INHBAP08476 426 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 TACR2P21452 398 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 HTRA4P83105 476 aaPredicted RBP17.08■□□□□ 0.32
CTSA-207ENST00000484855 FPGSQ05932 587 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 OLIG2Q13516 323 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 ZSCAN26Q16670 478 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 KCTD11Q693B1 232 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 TCEAL8Q8IYN2 117 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 CNTD1Q8N815 330 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 OR52K1Q8NGK4 314 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 SLC44A1Q8WWI5 657 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 BADQ92934 168 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 IL12RB2Q99665 862 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 TRABDQ9H4I3 376 aa17.08■□□□□ 0.32
CTSA-207ENST00000484855 IPO11Q9UI26 975 aaKnown RBP17.08■□□□□ 0.32
CTSA-207ENST00000484855 MIA3Q5JRA6 1907 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 GOLGA6L7A0A1B0GV03 622 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 DRGXA6NNA5 263 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 F5H5T6 163 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 C1QAP02745 245 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 PRKCHP24723 683 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 HARS2P49590 506 aaKnown RBP17.07■□□□□ 0.32
CTSA-207ENST00000484855 EPHB3P54753 998 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 CRADDP78560 199 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 ANO4Q32M45 955 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 CIR1Q86X95 450 aaPredicted RBP17.07■□□□□ 0.32
CTSA-207ENST00000484855 CTAGE3PQ8IX95 158 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 GPR65Q8IYL9 337 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 ANKRD42Q8N9B4 389 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 MGARPQ8TDB4 240 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 LRRC40Q9H9A6 602 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 SYBUQ9NX95 663 aa17.07■□□□□ 0.32
CTSA-207ENST00000484855 ACSL4O60488 711 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 USP12O75317 370 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 NEBLO76041 1014 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 SEC24CP53992 1094 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 STEAP4Q687X5 459 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 OTOP3Q7RTS5 596 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 CCNJLQ8IV13 435 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 PPM1NQ8N819 430 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 DNAAF3Q8N9W5 541 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 PLD4Q96BZ4 506 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 HMCESQ96FZ2 354 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 SMC6Q96SB8 1091 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 KIF9Q9HAQ2 790 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 UBP1Q9NZI7 540 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 UXTQ9UBK9 157 aaPredicted RBP17.06■□□□□ 0.32
CTSA-207ENST00000484855 MAFFQ9ULX9 164 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 DENND4CQ5VZ89 1909 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 CHD5Q8TDI0 1954 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 LILRB3O75022 631 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 LINC00271P0C7V0 271 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 CTSAP10619 480 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 PGAM1P18669 254 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 PPP3CCP48454 512 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 SLC11A2P49281 568 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 DNAJB7Q7Z6W7 309 aaPredicted RBP17.06■□□□□ 0.32
CTSA-207ENST00000484855 LRRC6Q86X45 466 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 LGI2Q8N0V4 545 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTSA-207ENST00000484855 PSMG2Q969U7 264 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 ZNF419Q96HQ0 510 aaPredicted RBP17.06■□□□□ 0.32
CTSA-207ENST00000484855 NAT9Q9BTE0 207 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 RXFP1Q9HBX9 757 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 GLOD4Q9HC38 313 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 CASS4Q9NQ75 786 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 NKIRAS1Q9NYS0 192 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 SAMD15Q9P1V8 674 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 SSX2IPQ9Y2D8 614 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 INSL6Q9Y581 213 aa17.06■□□□□ 0.32
CTSA-207ENST00000484855 IQANK1A0A1B0GTG1 560 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 GMNCA6NCL1 334 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 CXorf49A8MYA2 514 aaPredicted RBP17.05■□□□□ 0.32
CTSA-207ENST00000484855 NDUFAB1O14561 156 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 PSMD3O43242 534 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 CACNG3O60359 315 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 HLA-DQB2P05538 268 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 EN2P19622 333 aaPredicted RBP17.05■□□□□ 0.32
CTSA-207ENST00000484855 TRMT10BQ6PF06 316 aaKnown RBP17.05■□□□□ 0.32
CTSA-207ENST00000484855 UBE2Q1Q7Z7E8 422 aa17.05■□□□□ 0.32
CTSA-207ENST00000484855 SLC26A11Q86WA9 606 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms