RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 FAM172AQ8WUF8 416 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 OSCP1Q8WVF1 389 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 TEKT4Q8WW24 435 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 KCTD13Q8WZ19 329 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 RAPGEF5Q92565 580 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 EDEM1Q92611 657 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 FAM149B1Q96BN6 582 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 SNF8Q96H20 258 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 SHDQ96IW2 340 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 PIWIL1Q96J94 861 aaKnown RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 CALN1Q9BXU9 219 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 UBXN6Q9BZV1 441 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 NACA2Q9H009 215 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 ECT2Q9H8V3 914 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 KIF9Q9HAQ2 790 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 OBP2AQ9NY56 170 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 IL37Q9NZH6 218 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 STAP1Q9ULZ2 295 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 ZNF148Q9UQR1 794 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 DRG1Q9Y295 367 aaKnown RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 YJEFN3A6XGL0 299 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 E7ENQ6 273 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 MSI1O43347 362 aaKnown RBP7.14□□□□□ -1.27
BRCA1-216ENST00000484087 LIASO43766 372 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 CST8O60676 142 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 RNF40O75150 1001 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 KRT14P02533 472 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 FAM153BP0C7A2 387 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 SP9P0CG40 484 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 KRT10P13645 584 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 NDUFV2P19404 249 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 WEE1P30291 646 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 FLT3P36888 993 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 GGCXP38435 758 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 OPRD1P41143 372 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 RPL34P49207 117 aaKnown RBP7.14□□□□□ -1.27
BRCA1-216ENST00000484087 NUMBP49757 651 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 CDH6P55285 790 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 EIF3BP55884 814 aaKnown RBP7.14□□□□□ -1.27
BRCA1-216ENST00000484087 SLC7A9P82251 487 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 CSTF1Q05048 431 aaKnown RBP7.14□□□□□ -1.27
BRCA1-216ENST00000484087 IFFO1Q0D2I5 559 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 EFEMP1Q12805 493 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 TRADDQ15628 312 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 LPAL2Q16609 132 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 C15orf59Q2T9L4 293 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-216ENST00000484087 FAM153CQ494X1 144 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 CCDC14Q49A88 953 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 KCNT1Q5JUK3 1230 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 HECTD3Q5T447 861 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 HEATR6Q6AI08 1181 aaKnown RBP7.14□□□□□ -1.27
BRCA1-216ENST00000484087 LRIG3Q6UXM1 1119 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 TPGS1Q6ZTW0 290 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 NUDT18Q6ZVK8 323 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 BBS12Q6ZW61 710 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 STRADAQ7RTN6 431 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 ASCL5Q7RTU5 278 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 VSIG1Q86XK7 387 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 C1orf210Q8IVY1 113 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 ATG4AQ8WYN0 398 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 ART4Q93070 314 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 E2F7Q96AV8 911 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 CFAP57Q96MR6 1250 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 ZIM3Q96PE6 472 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 TRIM62Q9BVG3 475 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 TRPV5Q9NQA5 729 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 CNGB3Q9NQW8 809 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.14□□□□□ -1.27
BRCA1-216ENST00000484087 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.14□□□□□ -1.27
BRCA1-216ENST00000484087 THG1LQ9NWX6 298 aaKnown RBP7.14□□□□□ -1.27
BRCA1-216ENST00000484087 PLK2Q9NYY3 685 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 VPS18Q9P253 973 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 FAM153AQ9UHL3 310 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 ATP8A1Q9Y2Q0 1164 aa7.14□□□□□ -1.27
BRCA1-216ENST00000484087 GOLGA6CA6NDK9 693 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 POM121CA8CG34 1229 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 H3BQF6 201 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 SGK1O00141 431 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 TRDMT1O14717 391 aaKnown RBP7.13□□□□□ -1.27
BRCA1-216ENST00000484087 CAPN9O14815 690 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 MCF2LO15068 1137 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 LAMTOR5O43504 91 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 GREM1O60565 184 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 PPFIA2O75334 1257 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 DAB1O75553 588 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 ITGAVP06756 1048 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 GOLGA6DP0CG33 693 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 TCF4P15884 667 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 ZFXP17010 805 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-216ENST00000484087 IL1R2P27930 398 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 ECHS1P30084 290 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 NOS2P35228 1153 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 ACTN2P35609 894 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 HSD17B3P37058 310 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 MATKP42679 507 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 RPL21P46778 160 aaKnown RBP7.13□□□□□ -1.27
BRCA1-216ENST00000484087 GALK1P51570 392 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 PMS2P54278 862 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 YWHAZP63104 245 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms