RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CHIAQ9BZP6 476 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TPK1Q9H3S4 243 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TAS2R1Q9NYW7 299 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 MORF4L1Q9UBU8 362 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 VARSP26640 1264 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CYP4F8P98187 520 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 NR6A1Q15406 480 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 SYDE2Q5VT97 1194 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ZNF655Q8N720 491 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PPP1R16BQ96T49 567 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 EIF2AK1Q9BQI3 630 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PDPK1O15530 556 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ZC3H11AO75152 810 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 GRAP2O75791 330 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 MAPK1P28482 360 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CCNG1P51959 295 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PSME3P61289 254 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ZNF268Q14587 947 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CTC1Q2NKJ3 1217 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CLNKQ7Z7G1 428 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 FAM160B2Q86V87 743 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CRELD1Q96HD1 420 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 TBCDQ9BTW9 1192 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CLCA2Q9UQC9 943 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ADORA2BP29275 332 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PYHIN1Q6K0P9 492 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PHF20Q9BVI0 1012 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 GTPBP2Q9BX10 602 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CDH22Q9UJ99 828 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PLA2G4CQ9UP65 541 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 SNRPB2P08579 225 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ALDH4A1P30038 563 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 POFUT2Q9Y2G5 429 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ANKARQ7Z5J8 1434 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 C9IYK1 514 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 DDX3YO15523 660 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 RECQL5O94762 991 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CLTBP09497 229 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 MYBP10242 640 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ZNF3P17036 446 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 NOS3P29474 1203 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 GJA9P57773 515 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 FAAP100Q0VG06 881 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PTRHD1Q6GMV3 140 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 FAM126BQ8IXS8 530 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CDYL2Q8N8U2 506 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ASCC1Q8N9N2 400 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 MAP10Q9P2G4 905 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 DHRS7Q9Y394 339 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 BMP3P12645 472 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 MYL9P24844 172 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 NMT1P30419 496 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 SPESP1Q6UW49 350 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 P2RY8Q86VZ1 359 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ZCCHC9Q8N567 271 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 ADGRL2O95490 1459 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 EML1O00423 815 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PLATP00750 562 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 NPY2RP49146 381 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PTPN20Q4JDL3 420 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 STRIP1Q5VSL9 837 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PALB2Q86YC2 1186 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 DEPDC4Q8N2C3 294 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 C11orf24Q96F05 449 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 KCNS3Q9BQ31 491 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 RTKNQ9BST9 563 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 IRAK3Q9Y616 596 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 A0A0U1RQJ8 604 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 CHP2O43745 196 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 TCEA3O75764 348 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 USP17L8P0C7I0 530 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 DSG3P32926 999 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 HALP42357 657 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 DUOXA2Q1HG44 320 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PRR5LQ6MZQ0 368 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 TMEM214Q6NUQ4 689 aaKnown RBP10.41□□□□□ -0.74
COL12A1-207ENST00000483888 HAUS6Q7Z4H7 955 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 SLC7A5P1Q8MH63 180 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 GATAD2BQ8WXI9 593 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 IP6K1Q92551 441 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PCDHA6Q9UN73 950 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PCDHA8Q9Y5H6 950 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 PEX16Q9Y5Y5 336 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 RFX7Q2KHR2 1363 aa10.41□□□□□ -0.74
COL12A1-207ENST00000483888 SSX5O60225 188 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 APOC1P02654 83 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 CDK9P50750 372 aaKnown RBP10.4□□□□□ -0.74
COL12A1-207ENST00000483888 CDC42P60953 191 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 MGAT5Q09328 741 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.4□□□□□ -0.74
COL12A1-207ENST00000483888 GRTP1Q5TC63 336 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 RFWD3Q6PCD5 774 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 OR8K3Q8NH51 312 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 NAT9Q9BTE0 207 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 MAN1C1Q9NR34 630 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 PCDHB2Q9Y5E7 798 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 CASKO14936 926 aa10.4□□□□□ -0.74
COL12A1-207ENST00000483888 RBP1P09455 135 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms