RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 FAM193AP78312 1265 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 CENPCQ03188 943 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 KIF19Q2TAC6 998 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 BNIPLQ7Z465 357 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 RAB44Q7Z6P3 723 aaPredicted RBP20.41■□□□□ 0.86
HPS4-213ENST00000483631 SETD3Q86TU7 594 aaPredicted RBP20.41■□□□□ 0.86
HPS4-213ENST00000483631 NOP9Q86U38 636 aaKnown RBP20.41■□□□□ 0.86
HPS4-213ENST00000483631 STK40Q8N2I9 435 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 GATA6Q92908 595 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 SKA1Q96BD8 255 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 GBP4Q96PP9 640 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 TKTL2Q9H0I9 626 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 KDM4CQ9H3R0 1056 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 PCOLCE2Q9UKZ9 415 aa20.41■□□□□ 0.86
HPS4-213ENST00000483631 FNDC3AQ9Y2H6 1198 aaKnown RBP20.41■□□□□ 0.86
HPS4-213ENST00000483631 DRGXA6NNA5 263 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 VILLO15195 856 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 PSMD8P48556 350 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 NOMO3P69849 1222 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 DEUP1Q05D60 604 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 FAM46CQ5VWP2 391 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 NCEH1Q6PIU2 408 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 LRRC31Q6UY01 552 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 ZNF683Q8IZ20 524 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 AADATQ8N5Z0 425 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 BAHD1Q8TBE0 780 aaPredicted RBP20.4■□□□□ 0.86
HPS4-213ENST00000483631 ADAMTS14Q8WXS8 1223 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 OR8D1Q8WZ84 308 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 CDC6Q99741 560 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 GANQ9H2C0 597 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 IL21RQ9HBE5 538 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 TAB2Q9NYJ8 693 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 TMEM59LQ9UK28 342 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 VPS28Q9UK41 221 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 HS3ST2Q9Y278 367 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 SLCO1B1Q9Y6L6 691 aa20.4■□□□□ 0.86
HPS4-213ENST00000483631 IGLV3-10A0A075B6K4 115 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 HYAL3O43820 417 aaPredicted RBP20.39■□□□□ 0.85
HPS4-213ENST00000483631 PCDHGA12O60330 932 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 ADCY5O95622 1261 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 TOP3BO95985 862 aaKnown RBP20.39■□□□□ 0.85
HPS4-213ENST00000483631 IL1BP01584 269 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 NUDT1P36639 197 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 CTSKP43235 329 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 ADPRHP54922 357 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 RNASE9P60153 205 aaKnown RBP20.39■□□□□ 0.85
HPS4-213ENST00000483631 KRT83P78385 493 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 KRT31Q15323 416 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 FKBP15Q5T1M5 1219 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 TAF3Q5VWG9 929 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 C14orf80Q86SX3 495 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 SH2D3CQ8N5H7 860 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 CAMK1GQ96NX5 476 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 HAPLN3Q96S86 360 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 TBCBQ99426 244 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 C2orf49Q9BVC5 232 aaPredicted RBP20.39■□□□□ 0.85
HPS4-213ENST00000483631 ACE2Q9BYF1 805 aaPredicted RBP20.39■□□□□ 0.85
HPS4-213ENST00000483631 SIK2Q9H0K1 926 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 APOBEC2Q9Y235 224 aaKnown RBP20.39■□□□□ 0.85
HPS4-213ENST00000483631 SNX11Q9Y5W9 270 aa20.39■□□□□ 0.85
HPS4-213ENST00000483631 C1QTNF9BB2RNN3 333 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 MCF2LO15068 1137 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 FTH1P19P0C7X4 201 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 C1QTNF9P0C862 333 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 SPINK2P20155 84 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 FLT3P36888 993 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 CCT8P50990 548 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 IRAK1P51617 712 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 CLCN6P51797 869 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 CDR2Q01850 454 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 DLG2Q15700 870 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 ZNF783Q6ZMS7 281 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 TRIM72Q6ZMU5 477 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 ADAT2Q7Z6V5 191 aaKnown RBP20.38■□□□□ 0.85
HPS4-213ENST00000483631 OR52K2Q8NGK3 314 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 SETD7Q8WTS6 366 aaKnown RBP20.38■□□□□ 0.85
HPS4-213ENST00000483631 MUC3BQ9H195 1237 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 NOCTQ9UK39 431 aaKnown RBP20.38■□□□□ 0.85
HPS4-213ENST00000483631 PPM1HQ9ULR3 514 aa20.38■□□□□ 0.85
HPS4-213ENST00000483631 FAM47DPA6NHR8 397 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 C1QTNF3-AMACRE9PGA6 284 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 I6L893 689 aaPredicted RBP20.37■□□□□ 0.85
HPS4-213ENST00000483631 LATO43561 262 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 KRT37O76014 449 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 ENDOD1O94919 500 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 CYP1A1P04798 512 aaPredicted RBP20.37■□□□□ 0.85
HPS4-213ENST00000483631 MMEP08473 750 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 TFE3P19532 575 aaPredicted RBP20.37■□□□□ 0.85
HPS4-213ENST00000483631 DRD3P35462 400 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 JAM2P57087 298 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 C6orf118Q5T5N4 469 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 DCAF4L2Q8NA75 395 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 ANKRD20A12PQ8NF67 263 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 OR14C36Q8NHC7 312 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 CCDC114Q96M63 670 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 VPS16Q9H269 839 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 RETREG1Q9H6L5 497 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 ANLNQ9NQW6 1124 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 ANO10Q9NW15 660 aa20.37■□□□□ 0.85
HPS4-213ENST00000483631 FRYQ5TBA9 3013 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms