RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 CDX4O14627 284 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-215ENST00000481116 MID1O15344 667 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 CCP110O43303 1012 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 MT-CO1P00395 513 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 GLDCP23378 1020 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 OXTRP30559 389 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 ADRA1BP35368 520 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 PBX1P40424 430 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 PTPN9P43378 593 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 TPM4P67936 248 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 DUOXA1Q1HG43 343 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 ACCSLQ4AC99 568 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 FAM72AQ5TYM5 149 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 IL31Q6EBC2 164 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 FAM72DQ6L9T8 149 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 SLC23A3Q6PIS1 610 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 ERMP1Q7Z2K6 904 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 FAM72BQ86X60 149 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 KDM1BQ8NB78 822 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 OR7D4Q8NG98 312 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 OR2I1PQ8NGU4 316 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 FRS2Q8WU20 508 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 CENPIQ92674 756 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-215ENST00000481116 NUSAP1Q9BXS6 441 aaKnown RBP13.22□□□□□ -0.29
ABCF3-215ENST00000481116 MIR1-1HGQ9H1L0 117 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 C6orf106Q9H6K1 298 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-215ENST00000481116 FBRSQ9HAH7 460 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 AIPL1Q9NZN9 384 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 SERGEFQ9UGK8 458 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 EVLQ9UI08 416 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-215ENST00000481116 SLC25A13Q9UJS0 675 aa13.22□□□□□ -0.29
ABCF3-215ENST00000481116 A0A1W2PP55 124 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 TARSL2A2RTX5 802 aaKnown RBP13.21□□□□□ -0.29
ABCF3-215ENST00000481116 METTL12A8MUP2 240 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 PLK4O00444 970 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 DDX3XO00571 662 aaKnown RBP eCLIP13.21□□□□□ -0.29
ABCF3-215ENST00000481116 TM4SF5O14894 197 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 BNIP3LO60238 219 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 ENGP17813 658 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 OR1E1P30953 314 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 NNMTP40261 264 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 MAPK8P45983 427 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 PSMD8P48556 350 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 METAP1P53582 386 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 LIMK1P53667 647 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 OXCT1P55809 520 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 OGDHQ02218 1023 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 SULT2A1Q06520 285 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 KLHL30Q0D2K2 578 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 ARID5BQ14865 1188 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 DLG2Q15700 870 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 CST6Q15828 149 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 SKOR2Q2VWA4 1001 aaPredicted RBP13.21□□□□□ -0.29
ABCF3-215ENST00000481116 UAP1L1Q3KQV9 507 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 PPP1R15BQ5SWA1 713 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 SYCP2LQ5T4T6 812 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 SCYL2Q6P3W7 929 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 LINGO4Q6UY18 593 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 STRADAQ7RTN6 431 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 DRC7Q8IY82 874 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 PYROXD2Q8N2H3 581 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 GANCQ8TET4 914 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 CPLX3Q8WVH0 158 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 SNX19Q92543 992 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 FOXJ1Q92949 421 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 GTPBP2Q9BX10 602 aaKnown RBP13.21□□□□□ -0.29
ABCF3-215ENST00000481116 PABPC3Q9H361 631 aaKnown RBP13.21□□□□□ -0.29
ABCF3-215ENST00000481116 NDFIP2Q9NV92 336 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 FBXL12Q9NXK8 326 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 ZNF212Q9UDV6 495 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 OR12D3Q9UGF7 316 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 EIF2B4Q9UI10 523 aaKnown RBP13.21□□□□□ -0.29
ABCF3-215ENST00000481116 ACTL7AQ9Y615 435 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 SLCO1B1Q9Y6L6 691 aa13.21□□□□□ -0.29
ABCF3-215ENST00000481116 FAM47DPA6NHR8 397 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 K7ERQ8 282 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 SMAD6O43541 496 aaKnown RBP13.2□□□□□ -0.3
ABCF3-215ENST00000481116 RNASEH1O60930 286 aaKnown RBP13.2□□□□□ -0.3
ABCF3-215ENST00000481116 SEMA4FO95754 770 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 SERPINF2P08697 491 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 C7P10643 843 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 SLC8A1P32418 973 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 PRKCIP41743 596 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 ZBTB16Q05516 673 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 ARL13BQ3SXY8 428 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 POM121L1PQ3SYA9 428 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 TTC31Q49AM3 519 aaPredicted RBP13.2□□□□□ -0.3
ABCF3-215ENST00000481116 PPM1JQ5JR12 505 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 WDR45BQ5MNZ6 344 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 MANEALQ5VSG8 457 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 RWDD4Q6NW29 188 aaKnown RBP13.2□□□□□ -0.3
ABCF3-215ENST00000481116 DCUN1D2Q6PH85 259 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 Q6ZVU0 165 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 SETD3Q86TU7 594 aaPredicted RBP13.2□□□□□ -0.3
ABCF3-215ENST00000481116 ZCCHC9Q8N567 271 aaKnown RBP13.2□□□□□ -0.3
ABCF3-215ENST00000481116 SH2D3CQ8N5H7 860 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 AADATQ8N5Z0 425 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 CADM4Q8NFZ8 388 aa13.2□□□□□ -0.3
ABCF3-215ENST00000481116 DNASE2BQ8WZ79 361 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms